Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 IGBP1P3-201ENST00000447449 1000 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL596266.1-201ENST00000448132 400 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 RPS3AP15-201ENST00000483874 781 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC133963.2-201ENST00000513686 578 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC110760.3-202ENST00000515177 371 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 IGLV3-24-201ENST00000517477 197 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AP003066.2-201ENST00000529375 555 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AL353796.1-201ENST00000561542 3241 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 MIR1273E-201ENST00000581165 102 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC008507.2-201ENST00000588402 1176 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC245100.7-201ENST00000609678 442 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC073342.3-201ENST00000624211 193 ntBASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CHMP4CQ96CF2 ADAM24P-201ENST00000398655 2101 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 MAPK10-328ENST00000641553 4009 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 MIR133A2-201ENST00000347538 102 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 RN7SKP124-201ENST00000364730 341 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AP002784.2-201ENST00000397300 549 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 OR3A2-201ENST00000408891 1076 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CYCSP42-201ENST00000450823 238 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC090602.1-201ENST00000469695 252 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 SIAH1P1-201ENST00000479411 923 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 RPS4XP1-201ENST00000482189 787 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CDH12P2-201ENST00000504393 298 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ATP5LP3-201ENST00000514223 304 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 RN7SKP253-201ENST00000516424 309 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC020937.1-201ENST00000519677 1013 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC125612.1-201ENST00000547580 377 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 IGBP1P1-201ENST00000554337 1009 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AC090666.1-201ENST00000578241 445 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 RN7SL339P-201ENST00000580597 296 ntBASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CHMP4CQ96CF2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNA5SP326-201ENST00000363209 110 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 SNORA16A-201ENST00000384342 137 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-1320P-201ENST00000390838 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 RNU6-1269P-201ENST00000391139 107 ntBASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.61□□□□□ -1.35
CHMP4CQ96CF2 AL009179.1-201ENST00000406085 265 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms