Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC006349.1-201ENST00000555526 235 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL109741.3-201ENST00000561748 592 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL450270.1-201ENST00000606160 391 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 uc_338.9-201ENST00000617424 182 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC129778.1-202ENST00000623812 261 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL591379.1-207ENST00000635982 261 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC008691.1-209ENST00000642094 814 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC004817.4-201ENST00000602396 3625 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 HSPD1P11-201ENST00000508643 1702 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC114786.1-201ENST00000512892 1415 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 PHKBP1-201ENST00000450951 1951 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 MIR375-201ENST00000362103 64 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RN7SKP286-201ENST00000410894 299 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL357078.2-201ENST00000416486 427 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 ELOCP10-201ENST00000440624 327 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC005297.1-201ENST00000444765 862 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AP006222.1-205ENST00000450734 457 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RPL23AP23-201ENST00000452590 471 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RNU6-1218P-201ENST00000458990 108 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC092754.1-201ENST00000472975 479 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 NPM1P29-201ENST00000483112 803 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RPS27AP16-201ENST00000492222 470 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC006499.4-201ENST00000510947 694 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL671862.1-201ENST00000515851 349 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RNA5SP228-201ENST00000516232 133 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC100784.1-201ENST00000522790 310 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC134349.2-201ENST00000535136 910 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 NPM1P47-201ENST00000560843 856 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL671309.1-201ENST00000603750 544 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 ELOCP34-201ENST00000604436 327 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC009027.1-201ENST00000604510 479 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL356094.1-201ENST00000624663 1212 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AP003400.3-201ENST00000624904 346 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC090017.1-201ENST00000548612 1779 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS33AQ96AX1 DDX18P4-201ENST00000511690 1966 ntBASIC5.13□□□□□ -1.59
VPS33AQ96AX1 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 AP001642.1-201ENST00000624727 2117 ntBASIC5.12□□□□□ -1.59
VPS33AQ96AX1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS33AQ96AX1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms