Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 OR5AM1P-201ENST00000532136 1032 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 MTCYBP23-201ENST00000558717 1102 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 VN1R87P-201ENST00000596706 487 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 YES1P1-201ENST00000418510 1628 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC007938.2-201ENST00000604666 2634 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HPS3Q969F9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 CASC19-260ENST00000641828 2001 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.15□□□□□ -1.42
HPS3Q969F9 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.15□□□□□ -1.42
HPS3Q969F9 OR13C1P-202ENST00000641378 2919 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HPS3Q969F9 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HPS3Q969F9 RNA5SP453-201ENST00000362503 119 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HPS3Q969F9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 U6.112-201ENST00000384129 70 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 RNU6-244P-201ENST00000391028 104 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 GAPDHP15-201ENST00000398586 975 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC233289.1-201ENST00000403700 508 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 AC105402.1-201ENST00000413336 545 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 LINC01347-201ENST00000417964 355 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 MTCO3P4-201ENST00000419236 787 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 AC007161.1-204ENST00000423039 460 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 AC104843.2-201ENST00000427666 297 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MTND2P40-201ENST00000436718 841 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AL391987.1-201ENST00000441025 200 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 AL358794.1-201ENST00000445689 381 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 NXT1P1-201ENST00000458481 316 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 SNORD125-201ENST00000459538 96 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 RPS4XP6-201ENST00000477670 797 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 CYCSP22-201ENST00000517555 339 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 PMS2P3-207ENST00000529061 717 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HPS3Q969F9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 OR8K4P-201ENST00000534608 872 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC079600.1-201ENST00000550326 297 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MRPS21P7-201ENST00000566937 238 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 RBM22P12-201ENST00000567098 1255 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AGGF1P5-201ENST00000567900 919 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.15□□□□□ -1.42
HPS3Q969F9 MIR4789-201ENST00000577469 82 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AP005403.1-201ENST00000579720 229 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.15□□□□□ -1.42
HPS3Q969F9 CLIC4P2-201ENST00000601934 717 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AP000769.2-201ENST00000602344 396 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AP002906.1-201ENST00000603405 233 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 AC140725.3-201ENST00000616193 880 ntBASIC6.15□□□□□ -1.42
HPS3Q969F9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.15□□□□□ -1.42
HPS3Q969F9 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.15□□□□□ -1.42
HPS3Q969F9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HPS3Q969F9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HPS3Q969F9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms