Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 RNU1-82P-201ENST00000390851 165 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 RPL23AP26-201ENST00000412728 464 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 OR8G2P-201ENST00000412796 908 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AL158827.1-201ENST00000416300 391 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC022360.1-201ENST00000521058 340 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC109635.6-201ENST00000525487 1113 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC103968.1-201ENST00000557841 573 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 RN7SL802P-201ENST00000577858 299 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 AC069200.1-201ENST00000609511 323 ntBASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ALMS1Q8TCU4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC006058.1-201ENST00000568686 5067 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL139095.3-201ENST00000419672 1203 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 GLUD1P9-201ENST00000420997 1173 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SNORA59A-201ENST00000459326 152 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 RN7SL98P-201ENST00000462271 300 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC079064.1-201ENST00000528365 362 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC018628.1-201ENST00000624147 3819 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SMG1P6-201ENST00000532337 2930 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 ZFRP1-201ENST00000457579 2970 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 DPPA2P2-201ENST00000418220 897 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 NPM1P6-201ENST00000521088 871 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 HNRNPRP2-201ENST00000528421 743 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC073137.1-201ENST00000605636 634 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC005899.7-201ENST00000618199 588 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 MIR372-201ENST00000362225 67 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC022726.1-201ENST00000587475 207 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AC090948.2-201ENST00000607363 564 ntBASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ALMS1Q8TCU4 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
ALMS1Q8TCU4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.89
ALMS1Q8TCU4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
ALMS1Q8TCU4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RN7SKP267-201ENST00000410381 285 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 HMGN2P27-201ENST00000427352 270 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ACTR3P2-201ENST00000439585 1257 ntBASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ALMS1Q8TCU4 OR8V1P-201ENST00000395193 873 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms