Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 THAP12P8-201ENST00000447914 2115 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC004076.2-201ENST00000620532 3323 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE4Q8N205 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE4Q8N205 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE4Q8N205 RN7SKP149-201ENST00000363008 344 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AL353625.1-202ENST00000366273 571 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 NUDT19P3-201ENST00000404698 555 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC009506.2-201ENST00000420635 840 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 MGAT2P2-201ENST00000427194 797 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SYNE4Q8N205 NOP56P2-201ENST00000447491 769 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 MTND2P8-201ENST00000450555 1025 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 OR52Y1P-201ENST00000452418 828 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 RPL31P53-201ENST00000457065 348 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AP000797.2-201ENST00000475768 606 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 DEFB109A-201ENST00000482450 265 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 HMGN2P25-201ENST00000486956 268 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 HPRT1P1-201ENST00000509498 657 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 RN7SKP265-201ENST00000516448 223 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC079064.1-201ENST00000528365 362 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC135279.1-201ENST00000543493 504 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 BNIP3P24-201ENST00000593398 557 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC108738.1-201ENST00000603703 237 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC009027.1-201ENST00000604510 479 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC245389.2-201ENST00000616023 576 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC242843.1-201ENST00000618702 573 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC112694.2-201ENST00000623697 768 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AP003399.1-201ENST00000637534 361 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 TMEM30CP-203ENST00000637814 1035 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AL445523.1-201ENST00000451184 1362 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 AC079097.1-201ENST00000512187 1399 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SYNE4Q8N205 NLRP3P1-201ENST00000622303 1785 ntBASIC6.54□□□□□ -1.36
SYNE4Q8N205 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AL022393.1-201ENST00000625142 1677 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 RN7SKP95-201ENST00000362860 303 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 RNU1-32P-201ENST00000363937 159 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC106883.1-201ENST00000418805 562 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 MTCO2P20-201ENST00000437339 673 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC073072.2-201ENST00000447425 348 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 RN7SL385P-201ENST00000468873 276 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 OR7H2P-201ENST00000513483 306 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC034205.1-201ENST00000520621 638 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 MORF4L1P3-201ENST00000525966 950 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 OR7E13P-201ENST00000526052 910 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC234771.5-201ENST00000600161 514 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC008814.1-201ENST00000603797 406 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 U6.48-201ENST00000618523 106 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC068787.1-201ENST00000623908 691 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC119674.1-220ENST00000641502 1048 ntBASIC6.53□□□□□ -1.36
SYNE4Q8N205 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE4Q8N205 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE4Q8N205 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE4Q8N205 AP000641.1-201ENST00000531988 1639 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms