Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.04□□□□□ -1.44
CTR9Q6PD62 AC011447.7-201ENST00000624228 1590 ntBASIC6.04□□□□□ -1.44
CTR9Q6PD62 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC6.04□□□□□ -1.44
CTR9Q6PD62 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTR9Q6PD62 AC112198.2-201ENST00000426589 6996 ntBASIC6.04□□□□□ -1.44
CTR9Q6PD62 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 SMG1P7-201ENST00000565246 2704 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AL390316.1-201ENST00000406279 553 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 MTCO3P17-201ENST00000443775 513 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 MTND4LP12-201ENST00000448237 295 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 IGHV5-78-201ENST00000450948 295 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 RPL35AP28-201ENST00000459730 331 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 RPL5P16-201ENST00000471467 790 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC010350.1-201ENST00000504908 231 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC016559.2-201ENST00000510759 359 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC008033.2-201ENST00000542626 177 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC073575.2-201ENST00000614212 627 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AL445528.2-201ENST00000620582 470 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 AC112694.2-201ENST00000623697 768 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 MIPEPP2-201ENST00000422560 1819 ntBASIC6.03□□□□□ -1.44
CTR9Q6PD62 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CTR9Q6PD62 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.03□□□□□ -1.44
CTR9Q6PD62 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTR9Q6PD62 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CTR9Q6PD62 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTR9Q6PD62 RN7SKP113-201ENST00000363891 295 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 SNORA66-201ENST00000384792 133 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 MIR937-201ENST00000401271 86 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 AL359643.1-201ENST00000404109 423 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 RPL12P9-201ENST00000412942 488 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 TCEA1P1-201ENST00000449716 880 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 HIGD1AP8-201ENST00000453927 274 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 HMGB1P19-201ENST00000517578 577 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 MTCYBP13-201ENST00000578634 1093 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC008536.1-201ENST00000602872 669 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CTR9Q6PD62 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTR9Q6PD62 AC000374.1-201ENST00000434698 1745 ntBASIC6.02□□□□□ -1.45
CTR9Q6PD62 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CTR9Q6PD62 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTR9Q6PD62 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTR9Q6PD62 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CTR9Q6PD62 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CTR9Q6PD62 SNORA77-201ENST00000408716 125 ntBASIC6.01□□□□□ -1.45
CTR9Q6PD62 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 SUMO2P1-206ENST00000445436 284 ntBASIC6.01□□□□□ -1.45
CTR9Q6PD62 AL354714.3-201ENST00000447284 493 ntBASIC6.01□□□□□ -1.45
CTR9Q6PD62 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.01□□□□□ -1.45
CTR9Q6PD62 AL049874.2-201ENST00000492636 288 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms