Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.48□□□□□ -1.69
H3F3AP84243 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.48□□□□□ -1.69
H3F3AP84243 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.48□□□□□ -1.69
H3F3AP84243 AC074140.1-201ENST00000621617 208 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 AP000648.2-201ENST00000624182 404 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.48□□□□□ -1.69
H3F3AP84243 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
H3F3AP84243 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
H3F3AP84243 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 RNU4-4P-201ENST00000364588 130 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 RNA5SP455-201ENST00000365190 119 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 CHMP1B2P-201ENST00000399581 597 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 AL136116.2-201ENST00000404020 785 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 AL359643.1-201ENST00000404109 423 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.47□□□□□ -1.69
H3F3AP84243 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.47□□□□□ -1.69
H3F3AP84243 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
H3F3AP84243 OR13Z1P-201ENST00000416141 834 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 AC093162.1-201ENST00000419682 124 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.47□□□□□ -1.69
H3F3AP84243 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 AC092647.3-201ENST00000443044 633 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 RNU7-157P-201ENST00000459600 66 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 AC110749.1-201ENST00000462007 357 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.47□□□□□ -1.69
H3F3AP84243 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
H3F3AP84243 RPL37AP8-201ENST00000494116 276 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.47□□□□□ -1.69
H3F3AP84243 RPL23AP53-201ENST00000521854 457 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.47□□□□□ -1.69
H3F3AP84243 MEMO1P5-201ENST00000604810 406 ntBASIC4.47□□□□□ -1.69
H3F3AP84243 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3F3AP84243 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.47□□□□□ -1.69
H3F3AP84243 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.46□□□□□ -1.69
H3F3AP84243 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.46□□□□□ -1.69
H3F3AP84243 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.46□□□□□ -1.69
H3F3AP84243 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.46□□□□□ -1.69
H3F3AP84243 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.46□□□□□ -1.69
H3F3AP84243 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
H3F3AP84243 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
H3F3AP84243 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
H3F3AP84243 ECM1P2-201ENST00000503354 1577 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 CASC19-281ENST00000642118 1554 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3F3AP84243 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3F3AP84243 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
H3F3AP84243 RN7SKP278-201ENST00000410504 342 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.46□□□□□ -1.7
H3F3AP84243 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
H3F3AP84243 RPL35AP21-201ENST00000437667 333 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 CEACAMP7-201ENST00000444105 496 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 MRPL35P2-201ENST00000448009 511 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AL691482.1-201ENST00000453255 87 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC245028.2-201ENST00000458673 253 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 RPL7AP6-201ENST00000477943 801 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 AC105031.1-201ENST00000518550 476 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.46□□□□□ -1.7
H3F3AP84243 AL358913.1-201ENST00000554342 121 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AGGF1P9-201ENST00000561884 913 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 AC005377.1-201ENST00000605126 456 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AL445222.1-201ENST00000607259 628 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC073575.2-201ENST00000614212 627 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 MIR7155-201ENST00000615925 56 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC068870.2-201ENST00000620635 389 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 MIR6719-201ENST00000622428 87 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC112694.2-201ENST00000623697 768 ntBASIC4.46□□□□□ -1.7
H3F3AP84243 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.46□□□□□ -1.7
H3F3AP84243 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.46□□□□□ -1.7
H3F3AP84243 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.46□□□□□ -1.7
H3F3AP84243 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H3F3AP84243 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms