Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 ZNF321P-202ENST00000550843 495 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 CYCSP38-201ENST00000559840 322 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC018558.5-201ENST00000565840 952 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.42□□□□□ -1.54
SUMO3P55854 AL163952.1-202ENST00000569625 600 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 MIR3912-201ENST00000577566 105 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 BNIP3P24-201ENST00000593398 557 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC108865.2-201ENST00000606881 432 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC097478.2-201ENST00000610572 514 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.42□□□□□ -1.54
SUMO3P55854 uc_338.26-201ENST00000612659 160 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL139099.4-201ENST00000614802 114 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 AL035661.1-201ENST00000620459 1144 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AL136228.1-201ENST00000622221 319 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 AC006840.1-201ENST00000623069 542 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.42□□□□□ -1.54
SUMO3P55854 AP001284.1-201ENST00000528393 2118 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.42□□□□□ -1.54
SUMO3P55854 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SUMO3P55854 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SUMO3P55854 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
SUMO3P55854 AC025263.3-201ENST00000622965 1396 ntBASIC5.42□□□□□ -1.54
SUMO3P55854 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.41□□□□□ -1.54
SUMO3P55854 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.41□□□□□ -1.54
SUMO3P55854 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.41□□□□□ -1.54
SUMO3P55854 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.41□□□□□ -1.54
SUMO3P55854 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SUMO3P55854 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 SELENOWP1-201ENST00000322792 252 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 NACA3P-201ENST00000359690 648 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 RNU6-1214P-201ENST00000363650 109 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 SNORD116.1-201ENST00000365628 92 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 LRRC37BP1-201ENST00000398851 714 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 OOSP1-201ENST00000398992 1270 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 RNU4-64P-201ENST00000410795 131 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 AL008987.1-201ENST00000415528 237 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 RPS4XP5-201ENST00000419038 768 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 USP9YP11-201ENST00000427537 717 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 MTND5P25-201ENST00000430499 799 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.41□□□□□ -1.54
SUMO3P55854 AC073410.1-201ENST00000435125 589 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 AMYP1-201ENST00000440059 1023 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AL663074.2-201ENST00000440621 479 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 ATP5LP2-201ENST00000440646 311 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 AL603882.1-201ENST00000463059 681 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 RN7SL269P-201ENST00000467795 305 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 RPL35AP19-201ENST00000469425 329 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 PRDX3P4-201ENST00000470828 747 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 AP002884.1-201ENST00000479691 655 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 GAPDHP39-201ENST00000481866 979 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 RN7SL741P-201ENST00000482473 289 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 AC084024.2-201ENST00000503480 791 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC091951.3-201ENST00000504093 246 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.41□□□□□ -1.54
SUMO3P55854 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SUMO3P55854 snoU109.6-201ENST00000516831 118 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 IGKV2-36-201ENST00000519999 223 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 COX6B1P6-201ENST00000522347 255 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC138832.1-201ENST00000522871 556 ntBASIC5.41□□□□□ -1.54
SUMO3P55854 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.41□□□□□ -1.54
SUMO3P55854 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms