Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PPIAP9-201ENST00000403866 498 ntBASIC5.1□□□□□ -1.59
PDX1P52945 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PDX1P52945 RPL26P29-201ENST00000415623 438 ntBASIC5.1□□□□□ -1.59
PDX1P52945 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.1□□□□□ -1.59
PDX1P52945 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 AL354766.1-201ENST00000423396 542 ntBASIC5.1□□□□□ -1.59
PDX1P52945 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 CCRL1P1-201ENST00000449542 1053 ntBASIC5.1□□□□□ -1.59
PDX1P52945 CBX1P2-201ENST00000453841 458 ntBASIC5.1□□□□□ -1.59
PDX1P52945 MTND6P32-201ENST00000457611 483 ntBASIC5.1□□□□□ -1.59
PDX1P52945 EIF2S2P4-201ENST00000461070 984 ntBASIC5.1□□□□□ -1.59
PDX1P52945 RPS29P22-201ENST00000472363 168 ntBASIC5.1□□□□□ -1.59
PDX1P52945 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.1□□□□□ -1.59
PDX1P52945 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 MIR3934-201ENST00000579806 107 ntBASIC5.1□□□□□ -1.59
PDX1P52945 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PDX1P52945 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 MIMT1-201ENST00000597105 1050 ntBASIC5.1□□□□□ -1.59
PDX1P52945 AL159169.2-201ENST00000610061 1269 ntBASIC5.1□□□□□ -1.59
PDX1P52945 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.1□□□□□ -1.59
PDX1P52945 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 AC079298.2-201ENST00000623885 459 ntBASIC5.1□□□□□ -1.59
PDX1P52945 AL353662.3-201ENST00000625131 237 ntBASIC5.1□□□□□ -1.59
PDX1P52945 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
PDX1P52945 AC026523.2-201ENST00000625039 7739 ntBASIC5.1□□□□□ -1.59
PDX1P52945 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDX1P52945 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.1□□□□□ -1.59
PDX1P52945 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 AC005261.2-201ENST00000593427 4258 ntBASIC5.09□□□□□ -1.59
PDX1P52945 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PDX1P52945 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.59
PDX1P52945 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 AC012078.1-201ENST00000405035 1646 ntBASIC5.09□□□□□ -1.59
PDX1P52945 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 MTHFD2P5-201ENST00000320415 844 ntBASIC5.09□□□□□ -1.59
PDX1P52945 MIR105-1-201ENST00000385222 81 ntBASIC5.09□□□□□ -1.59
PDX1P52945 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDX1P52945 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.09□□□□□ -1.59
PDX1P52945 EI24P4-201ENST00000423683 1078 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.09□□□□□ -1.59
PDX1P52945 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 TRY2P-201ENST00000448860 689 ntBASIC5.09□□□□□ -1.59
PDX1P52945 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.09□□□□□ -1.59
PDX1P52945 AC092754.1-201ENST00000472975 479 ntBASIC5.09□□□□□ -1.59
PDX1P52945 STRADBP1-201ENST00000478954 1281 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC058823.1-201ENST00000485315 474 ntBASIC5.09□□□□□ -1.59
PDX1P52945 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.09□□□□□ -1.59
PDX1P52945 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AP001804.2-201ENST00000533932 910 ntBASIC5.09□□□□□ -1.59
PDX1P52945 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.09□□□□□ -1.59
PDX1P52945 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 OR11H3P-201ENST00000554547 982 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC090079.2-201ENST00000575289 768 ntBASIC5.09□□□□□ -1.59
PDX1P52945 RN7SL356P-201ENST00000582228 248 ntBASIC5.09□□□□□ -1.59
PDX1P52945 ELOCP28-201ENST00000590044 317 ntBASIC5.09□□□□□ -1.59
PDX1P52945 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.09□□□□□ -1.59
PDX1P52945 AL133247.2-201ENST00000603236 482 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AL158211.2-201ENST00000607282 395 ntBASIC5.09□□□□□ -1.59
PDX1P52945 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.09□□□□□ -1.59
PDX1P52945 AL162574.1-201ENST00000615702 950 ntBASIC5.09□□□□□ -1.59
PDX1P52945 RMST_5.1-201ENST00000618704 126 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC015722.2-201ENST00000622210 551 ntBASIC5.09□□□□□ -1.59
PDX1P52945 AC135068.5-201ENST00000624197 983 ntBASIC5.09□□□□□ -1.59
PDX1P52945 INTS6P1-201ENST00000504674 2530 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms