Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 DUTP1-201ENST00000493631 470 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.02□□□□□ -1.61
SOX2P48431 AC034244.1-201ENST00000507687 207 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX2P48431 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 MAST4-IT1-201ENST00000514241 658 ntBASIC5.02□□□□□ -1.61
SOX2P48431 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.02□□□□□ -1.61
SOX2P48431 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 OR5AM1P-201ENST00000532136 1032 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 AC137627.1-201ENST00000545761 289 ntBASIC5.02□□□□□ -1.61
SOX2P48431 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.02□□□□□ -1.61
SOX2P48431 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 CYP2C60P-201ENST00000566088 139 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 AC069366.1-201ENST00000583159 838 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AL020997.3-201ENST00000602843 359 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC002069.2-201ENST00000603580 883 ntBASIC5.02□□□□□ -1.61
SOX2P48431 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX2P48431 AL139344.1-201ENST00000605228 195 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC108865.2-201ENST00000606881 432 ntBASIC5.02□□□□□ -1.61
SOX2P48431 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX2P48431 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AC099654.6-201ENST00000636487 512 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC007603.3-201ENST00000636915 979 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC01808-202ENST00000641680 1116 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AP001029.2-203ENST00000589795 4910 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX2P48431 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 MTND5P31-201ENST00000419366 1374 ntBASIC5.02□□□□□ -1.61
SOX2P48431 MTND4P10-201ENST00000446199 1363 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX2P48431 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 AC008627.1-201ENST00000517511 1704 ntBASIC5.01□□□□□ -1.61
SOX2P48431 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SOX2P48431 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SOX2P48431 SNORA5.1-201ENST00000384275 131 ntBASIC5.01□□□□□ -1.61
SOX2P48431 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SOX2P48431 AL035419.1-201ENST00000397037 564 ntBASIC5.01□□□□□ -1.61
SOX2P48431 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 AL133260.1-201ENST00000405720 405 ntBASIC5.01□□□□□ -1.61
SOX2P48431 RNA5SP498-201ENST00000411342 120 ntBASIC5.01□□□□□ -1.61
SOX2P48431 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AL356320.2-201ENST00000417263 507 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 HMGB3P10-201ENST00000434734 572 ntBASIC5.01□□□□□ -1.61
SOX2P48431 NANOGP2-201ENST00000435391 727 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 AL359265.1-201ENST00000440296 795 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AL353093.1-201ENST00000441292 436 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.01□□□□□ -1.61
SOX2P48431 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.01□□□□□ -1.61
SOX2P48431 RPSAP51-201ENST00000497462 645 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX2P48431 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC117522.2-201ENST00000510049 657 ntBASIC5.01□□□□□ -1.61
SOX2P48431 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX2P48431 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 RNA5SP441-201ENST00000516809 88 ntBASIC5.01□□□□□ -1.61
SOX2P48431 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.01□□□□□ -1.61
SOX2P48431 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX2P48431 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX2P48431 AC027104.1-201ENST00000563702 681 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AC023813.2-201ENST00000564321 469 ntBASIC5.01□□□□□ -1.61
SOX2P48431 AC095057.3-201ENST00000567102 1157 ntBASIC5.01□□□□□ -1.61
SOX2P48431 MTND4LP24-201ENST00000572277 291 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms