Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL12P48061 LSM1P2-201ENST00000604911 322 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.96□□□□□ -1.62
CXCL12P48061 AC007497.1-201ENST00000610421 561 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 AC005962.2-201ENST00000611427 652 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 AL121873.1-201ENST00000616013 524 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 AC068724.3-201ENST00000625906 87 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
CXCL12P48061 OR52H1-202ENST00000641796 1061 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL12P48061 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 AL137100.1-201ENST00000556703 1620 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CXCL12P48061 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CXCL12P48061 AC009962.1-201ENST00000567327 3813 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 AL078595.2-201ENST00000605309 1780 ntBASIC4.96□□□□□ -1.62
CXCL12P48061 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.96□□□□□ -1.62
CXCL12P48061 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CXCL12P48061 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CXCL12P48061 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CXCL12P48061 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL12P48061 SNORD113.2-201ENST00000364166 89 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 MIR129-1-201ENST00000384972 72 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 ELOCP19-201ENST00000411919 318 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AL592293.2-201ENST00000422292 996 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL12P48061 TXNP5-201ENST00000441043 315 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AC016772.1-201ENST00000444170 1261 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AC020898.1-201ENST00000474167 787 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AC093815.1-201ENST00000508637 280 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AC026782.2-201ENST00000510845 636 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 OR5M2P-201ENST00000529003 936 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.95□□□□□ -1.62
CXCL12P48061 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL12P48061 MIR7853-201ENST00000584820 132 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 AC103792.1-201ENST00000603591 919 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 FAM27B-201ENST00000610601 213 ntBASIC4.95□□□□□ -1.62
CXCL12P48061 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL12P48061 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CXCL12P48061 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CXCL12P48061 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.95□□□□□ -1.62
CXCL12P48061 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.95□□□□□ -1.62
CXCL12P48061 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CXCL12P48061 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CXCL12P48061 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 RNA5SP447-201ENST00000363749 119 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL12P48061 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL12P48061 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL12P48061 AC017078.1-201ENST00000416146 368 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 COX6CP13-201ENST00000428703 226 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.94□□□□□ -1.62
CXCL12P48061 BX842559.2-201ENST00000451418 605 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 NUTF2P7-201ENST00000453086 375 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 Z95152.1-201ENST00000453556 656 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL12P48061 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.94□□□□□ -1.62
CXCL12P48061 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL12P48061 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.94□□□□□ -1.62
CXCL12P48061 MIR4420-201ENST00000583944 77 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 RPL12P25-202ENST00000598100 674 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 AC005191.1-201ENST00000603950 358 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 RBPJP2-201ENST00000618187 1444 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL12P48061 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CXCL12P48061 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.94□□□□□ -1.62
CXCL12P48061 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CXCL12P48061 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CXCL12P48061 MSL3P1-202ENST00000440028 1468 ntBASIC4.94□□□□□ -1.62
CXCL12P48061 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
CXCL12P48061 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CXCL12P48061 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms