Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HMGN2P25-201ENST00000486956 268 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC3P40938 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC3P40938 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC3P40938 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 SEPT10P1-201ENST00000517342 1162 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC3P40938 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC3P40938 MIR3934-201ENST00000579806 107 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AC011447.4-201ENST00000587562 111 ntBASIC4.71□□□□□ -1.66
RFC3P40938 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 AC008814.1-201ENST00000603797 406 ntBASIC4.71□□□□□ -1.66
RFC3P40938 AL162431.4-201ENST00000604674 411 ntBASIC4.71□□□□□ -1.66
RFC3P40938 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFC3P40938 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC3P40938 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
RFC3P40938 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC3P40938 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC3P40938 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC3P40938 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC3P40938 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 AL133270.1-201ENST00000402635 279 ntBASIC4.7□□□□□ -1.66
RFC3P40938 PTP4A1P1-201ENST00000420539 515 ntBASIC4.7□□□□□ -1.66
RFC3P40938 SETP10-201ENST00000424368 814 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.7□□□□□ -1.66
RFC3P40938 AC104837.2-201ENST00000427236 424 ntBASIC4.7□□□□□ -1.66
RFC3P40938 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 AC090018.1-201ENST00000434369 367 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 RPL34P20-201ENST00000442771 351 ntBASIC4.7□□□□□ -1.66
RFC3P40938 NOP56P2-201ENST00000447491 769 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AP000797.2-201ENST00000475768 606 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AL049874.2-201ENST00000492636 288 ntBASIC4.7□□□□□ -1.66
RFC3P40938 RPL37AP8-201ENST00000494116 276 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 AC002456.2-201ENST00000509356 380 ntBASIC4.7□□□□□ -1.66
RFC3P40938 OR5AZ1P-201ENST00000527448 943 ntBASIC4.7□□□□□ -1.66
RFC3P40938 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.7□□□□□ -1.66
RFC3P40938 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.7□□□□□ -1.66
RFC3P40938 MIR4691-201ENST00000583764 85 ntBASIC4.7□□□□□ -1.66
RFC3P40938 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 AC087783.2-201ENST00000605070 562 ntBASIC4.7□□□□□ -1.66
RFC3P40938 FAM25E-202ENST00000608562 189 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AC010632.3-201ENST00000611377 369 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AL049539.1-201ENST00000611964 459 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AC022960.2-201ENST00000616300 666 ntBASIC4.7□□□□□ -1.66
RFC3P40938 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AP003400.2-201ENST00000624036 666 ntBASIC4.7□□□□□ -1.66
RFC3P40938 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RFC3P40938 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RFC3P40938 MAPK10-349ENST00000641767 3661 ntBASIC4.7□□□□□ -1.66
RFC3P40938 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC3P40938 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC3P40938 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
RFC3P40938 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RFC3P40938 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC3P40938 IRF5P1-201ENST00000504852 2164 ntBASIC4.7□□□□□ -1.66
RFC3P40938 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.69□□□□□ -1.66
RFC3P40938 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFC3P40938 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RFC3P40938 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.69□□□□□ -1.66
RFC3P40938 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFC3P40938 RN7SKP114-201ENST00000410327 279 ntBASIC4.69□□□□□ -1.66
RFC3P40938 AC012519.1-201ENST00000424588 610 ntBASIC4.69□□□□□ -1.66
RFC3P40938 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.69□□□□□ -1.66
RFC3P40938 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.69□□□□□ -1.66
RFC3P40938 TAAR4P-201ENST00000454843 1039 ntBASIC4.69□□□□□ -1.66
RFC3P40938 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.69□□□□□ -1.66
RFC3P40938 RPS3AP41-201ENST00000462701 778 ntBASIC4.69□□□□□ -1.66
RFC3P40938 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.69□□□□□ -1.66
RFC3P40938 AC097484.1-201ENST00000471148 389 ntBASIC4.69□□□□□ -1.66
RFC3P40938 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.69□□□□□ -1.66
RFC3P40938 AC020779.1-201ENST00000478757 796 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms