Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PRPF38AP1-201ENST00000451976 933 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC004815.1-201ENST00000484185 331 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC093763.2-201ENST00000505334 1223 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 OR5M14P-201ENST00000506803 618 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 RNU6-491P-201ENST00000516099 110 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.44□□□□□ -1.54
PDGFRAP16234 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 AC051619.2-201ENST00000559063 397 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.44□□□□□ -1.54
PDGFRAP16234 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFRAP16234 AP005131.7-201ENST00000610087 611 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC090527.3-201ENST00000619041 548 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC018445.2-201ENST00000622987 260 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 FRG1EP-201ENST00000634469 770 ntBASIC5.44□□□□□ -1.54
PDGFRAP16234 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDGFRAP16234 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.44□□□□□ -1.54
PDGFRAP16234 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDGFRAP16234 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PDGFRAP16234 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDGFRAP16234 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 NUDT19P3-201ENST00000404698 555 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AMZ2P2-201ENST00000406819 1057 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFRAP16234 SPTLC1P2-201ENST00000407089 121 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 COX5BP7-201ENST00000414780 274 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 PCNPP4-201ENST00000414817 517 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 OR51A6P-201ENST00000418680 1004 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFRAP16234 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 AL589765.3-201ENST00000446084 462 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 EIF2S2P4-201ENST00000461070 984 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 RPL5P22-201ENST00000480199 884 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFRAP16234 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AC134349.2-201ENST00000535136 910 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFRAP16234 AC010503.3-201ENST00000594355 540 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.43□□□□□ -1.54
PDGFRAP16234 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFRAP16234 AC107308.1-201ENST00000615897 301 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 AC105105.5-201ENST00000622635 1294 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.43□□□□□ -1.54
PDGFRAP16234 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.43□□□□□ -1.54
PDGFRAP16234 TMEM30CP-203ENST00000637814 1035 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 SAMMSON-227ENST00000642114 1199 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PDGFRAP16234 STX3-208ENST00000641815 3236 ntBASIC5.43□□□□□ -1.54
PDGFRAP16234 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDGFRAP16234 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.42□□□□□ -1.54
PDGFRAP16234 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PDGFRAP16234 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PDGFRAP16234 RPL10P10-201ENST00000403509 664 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 MIR1182-201ENST00000408363 97 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC093084.1-201ENST00000424233 687 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 MTND4LP13-201ENST00000425022 298 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 NPM1P22-201ENST00000427761 952 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC009238.2-201ENST00000431026 355 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AC046176.1-201ENST00000435260 1170 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC100784.1-201ENST00000522790 310 ntBASIC5.42□□□□□ -1.54
PDGFRAP16234 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.42□□□□□ -1.54
PDGFRAP16234 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms