Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 AC003973.3-201ENST00000624863 2822 ntBASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.05□□□□□ -1.6
RAB40ALP0C0E4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC011933.2-201ENST00000578539 2790 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RNU1-106P-201ENST00000384382 164 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL589647.1-201ENST00000402485 466 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 NDUFA5P10-201ENST00000432147 357 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC074367.1-201ENST00000438685 1125 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RPL12P3-201ENST00000440080 396 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL359265.1-201ENST00000440296 795 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 Z92846.1-201ENST00000456203 268 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC092754.1-201ENST00000472975 479 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RWDD4P1-201ENST00000488019 565 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RNA5SP230-201ENST00000517039 122 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 OR4A17P-201ENST00000526032 904 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC024940.3-201ENST00000538551 316 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL136520.1-202ENST00000555494 763 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 MIR3908-201ENST00000579798 126 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 RN7SL356P-201ENST00000582228 248 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 MIR4660-201ENST00000583549 74 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC015849.2-201ENST00000605738 409 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL512506.1-201ENST00000613918 449 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AL356274.1-201ENST00000617064 410 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 LINC01739-205ENST00000641890 573 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC007342.7-201ENST00000624610 2337 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC131971.1-201ENST00000332881 1482 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 AC068870.1-201ENST00000563737 2455 ntBASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RAB40ALP0C0E4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC114947.2-201ENST00000565748 2125 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC083899.1-201ENST00000454465 3819 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 HMGB3P7-201ENST00000400214 611 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 HSPA8P15-201ENST00000401676 786 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AL136131.1-201ENST00000406079 803 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AL133482.1-201ENST00000415988 498 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC009784.1-201ENST00000426484 460 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 HMGN2P27-201ENST00000427352 270 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 LINC02210-201ENST00000444561 288 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 SEPT7P3-201ENST00000455017 621 ntBASIC5.03□□□□□ -1.6
RAB40ALP0C0E4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms