Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.43□□□□□ -1.7
FREM3P0C091 OR2A3P-201ENST00000493774 953 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.43□□□□□ -1.7
FREM3P0C091 NDUFB4P11-201ENST00000560510 395 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
FREM3P0C091 TLK1P1-201ENST00000456760 2440 ntBASIC4.43□□□□□ -1.7
FREM3P0C091 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
FREM3P0C091 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FREM3P0C091 Y_RNA.625-201ENST00000411256 107 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.42□□□□□ -1.7
FREM3P0C091 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.42□□□□□ -1.7
FREM3P0C091 ENPP7P9-201ENST00000514456 627 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
FREM3P0C091 MIR4472-2-201ENST00000582069 67 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 EIF1P5-201ENST00000585002 234 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.42□□□□□ -1.7
FREM3P0C091 AC090181.2-201ENST00000602975 672 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.42□□□□□ -1.7
FREM3P0C091 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 AC003985.2-201ENST00000562268 1669 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 AC008079.2-201ENST00000623543 20396 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 GLULP6-201ENST00000399502 913 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 RPL26P29-201ENST00000415623 438 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.42□□□□□ -1.7
FREM3P0C091 NRBF2P3-201ENST00000432731 865 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 RNA5SP228-201ENST00000516232 133 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 OR5AN2P-201ENST00000534535 896 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.42□□□□□ -1.7
FREM3P0C091 AC020910.3-201ENST00000603701 874 ntBASIC4.42□□□□□ -1.7
FREM3P0C091 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.42□□□□□ -1.7
FREM3P0C091 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
FREM3P0C091 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
FREM3P0C091 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 NCOA4P2-201ENST00000340589 1813 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
FREM3P0C091 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.41□□□□□ -1.7
FREM3P0C091 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 HMGN2P27-201ENST00000427352 270 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 USP9YP9-201ENST00000429406 715 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 AL136455.1-201ENST00000441083 1240 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 OR52J1P-201ENST00000450596 932 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC234781.3-201ENST00000452540 973 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 RN7SL189P-201ENST00000468631 289 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.41□□□□□ -1.7
FREM3P0C091 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.41□□□□□ -1.7
FREM3P0C091 AC092593.2-201ENST00000513866 913 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.41□□□□□ -1.7
FREM3P0C091 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.41□□□□□ -1.7
FREM3P0C091 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.41□□□□□ -1.7
FREM3P0C091 AL110118.1-201ENST00000553543 400 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC079075.1-201ENST00000559543 878 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 SETP3-201ENST00000581726 813 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC209154.1-201ENST00000582156 337 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 AL133338.2-201ENST00000604292 736 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.41□□□□□ -1.7
FREM3P0C091 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
FREM3P0C091 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
FREM3P0C091 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
FREM3P0C091 AC131971.1-201ENST00000332881 1482 ntBASIC4.41□□□□□ -1.7
FREM3P0C091 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.41□□□□□ -1.7
FREM3P0C091 CASC19-206ENST00000641028 1430 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms