Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL159169.2-201ENST00000610061 1269 ntBASIC5.46□□□□□ -1.54
TPM1P09493 MIR6780B-201ENST00000610307 79 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RPSAP73-201ENST00000614820 330 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-368P-201ENST00000620928 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AP001005.3-201ENST00000622049 129 ntBASIC5.46□□□□□ -1.54
TPM1P09493 RNU6-538P-201ENST00000622329 107 ntBASIC5.46□□□□□ -1.54
TPM1P09493 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TPM1P09493 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM1P09493 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM1P09493 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 OR51C1P-202ENST00000641159 1444 ntBASIC5.46□□□□□ -1.54
TPM1P09493 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.46□□□□□ -1.54
TPM1P09493 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.46□□□□□ -1.54
TPM1P09493 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TPM1P09493 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TPM1P09493 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM1P09493 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TPM1P09493 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TPM1P09493 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TPM1P09493 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM1P09493 CKS1BP6-201ENST00000424932 240 ntBASIC5.45□□□□□ -1.54
TPM1P09493 CYCSP12-201ENST00000437729 300 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM1P09493 AL450023.3-201ENST00000440592 271 ntBASIC5.45□□□□□ -1.54
TPM1P09493 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 HMGB1P4-201ENST00000455362 567 ntBASIC5.45□□□□□ -1.54
TPM1P09493 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 RN7SL517P-201ENST00000462240 305 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AC107015.1-201ENST00000466902 747 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AC094085.1-201ENST00000468914 584 ntBASIC5.45□□□□□ -1.54
TPM1P09493 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 RN7SL799P-201ENST00000475891 298 ntBASIC5.45□□□□□ -1.54
TPM1P09493 NIP7P2-201ENST00000485801 544 ntBASIC5.45□□□□□ -1.54
TPM1P09493 UGT2A3P7-201ENST00000510485 734 ntBASIC5.45□□□□□ -1.54
TPM1P09493 RNA5SP473-201ENST00000516402 125 ntBASIC5.45□□□□□ -1.54
TPM1P09493 Y_RNA.719-201ENST00000517156 106 ntBASIC5.45□□□□□ -1.54
TPM1P09493 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.45□□□□□ -1.54
TPM1P09493 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TPM1P09493 AC011270.1-201ENST00000558606 583 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.45□□□□□ -1.54
TPM1P09493 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 uc_338.18-201ENST00000615451 175 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AL356752.1-201ENST00000615844 593 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AC244100.4-201ENST00000617747 388 ntBASIC5.45□□□□□ -1.54
TPM1P09493 AF117829.2-201ENST00000619538 361 ntBASIC5.45□□□□□ -1.54
TPM1P09493 MAPK10-303ENST00000641324 3959 ntBASIC5.45□□□□□ -1.54
TPM1P09493 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.45□□□□□ -1.54
TPM1P09493 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TPM1P09493 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TPM1P09493 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 RNU1-94P-201ENST00000362627 173 ntBASIC5.44□□□□□ -1.54
TPM1P09493 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 SNORA70.10-201ENST00000384515 134 ntBASIC5.44□□□□□ -1.54
TPM1P09493 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TPM1P09493 RPS24P12-201ENST00000402084 394 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AL592291.1-201ENST00000403830 352 ntBASIC5.44□□□□□ -1.54
TPM1P09493 CEACAMP8-201ENST00000413902 580 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM1P09493 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.44□□□□□ -1.54
TPM1P09493 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 RPS29P9-201ENST00000440360 171 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 RHEBP2-201ENST00000450289 600 ntBASIC5.44□□□□□ -1.54
TPM1P09493 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.44□□□□□ -1.54
TPM1P09493 YRDCP3-201ENST00000456507 480 ntBASIC5.44□□□□□ -1.54
TPM1P09493 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TPM1P09493 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.44□□□□□ -1.54
TPM1P09493 RN7SKP34-201ENST00000516142 244 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.44□□□□□ -1.54
TPM1P09493 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.44□□□□□ -1.54
TPM1P09493 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.44□□□□□ -1.54
TPM1P09493 RPL21P7-201ENST00000557463 483 ntBASIC5.44□□□□□ -1.54
TPM1P09493 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM1P09493 RN7SL176P-201ENST00000580352 264 ntBASIC5.44□□□□□ -1.54
TPM1P09493 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.44□□□□□ -1.54
TPM1P09493 AC124856.1-201ENST00000600819 896 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms