Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL356390.1-201ENST00000455684 397 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 RN7SL197P-201ENST00000466981 299 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA1P02708 IMPA1P1-201ENST00000510718 842 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.51□□□□□ -1.53
CHRNA1P02708 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.51□□□□□ -1.53
CHRNA1P02708 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA1P02708 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.51□□□□□ -1.53
CHRNA1P02708 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.51□□□□□ -1.53
CHRNA1P02708 AC068790.4-201ENST00000602474 263 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 AC005377.1-201ENST00000605126 456 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA1P02708 AC105105.5-201ENST00000622635 1294 ntBASIC5.51□□□□□ -1.53
CHRNA1P02708 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA1P02708 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA1P02708 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CHRNA1P02708 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.51□□□□□ -1.53
CHRNA1P02708 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA1P02708 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHRNA1P02708 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
CHRNA1P02708 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 AC010132.2-201ENST00000295493 1043 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 RPS4XP9-201ENST00000405151 780 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RPS16P5-201ENST00000406501 404 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RNU2-50P-201ENST00000410494 143 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 AC092570.3-201ENST00000420113 693 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RPL19P16-201ENST00000433839 588 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA1P02708 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA1P02708 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA1P02708 NDUFA12P1-201ENST00000455914 406 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RPL5P16-201ENST00000471467 790 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 RPL23AP72-201ENST00000492447 435 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA1P02708 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA1P02708 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.5□□□□□ -1.53
CHRNA1P02708 ADAM3B-201ENST00000569937 840 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 EIF1P5-201ENST00000585002 234 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.5□□□□□ -1.53
CHRNA1P02708 AC020910.3-201ENST00000603701 874 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 AC011453.2-201ENST00000603737 729 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 TCP11X1-202ENST00000622971 1372 ntBASIC5.5□□□□□ -1.53
CHRNA1P02708 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.5□□□□□ -1.53
CHRNA1P02708 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CHRNA1P02708 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CHRNA1P02708 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.5□□□□□ -1.53
CHRNA1P02708 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHRNA1P02708 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC099654.2-201ENST00000433031 1980 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 AP001029.2-203ENST00000589795 4910 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 RNA5SP223-201ENST00000365174 120 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 ATP5HP3-201ENST00000396994 486 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 FABP12P1-201ENST00000401911 322 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 RN7SKP100-201ENST00000411258 284 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.49□□□□□ -1.53
CHRNA1P02708 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC023271.1-201ENST00000445936 1090 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA1P02708 BX842559.2-201ENST00000451418 605 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC104849.1-201ENST00000462623 405 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA1P02708 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA1P02708 AC021193.1-201ENST00000511607 420 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 FTH1P11-201ENST00000517577 551 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 KCTD9P6-201ENST00000522306 950 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 AC012339.2-201ENST00000523996 453 ntBASIC5.49□□□□□ -1.53
CHRNA1P02708 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.49□□□□□ -1.53
CHRNA1P02708 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA1P02708 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.49□□□□□ -1.53
CHRNA1P02708 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CHRNA1P02708 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CHRNA1P02708 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.49□□□□□ -1.53
CHRNA1P02708 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CHRNA1P02708 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms