Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.56□□□□□ -1.68
SPTA1P02549 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SPTA1P02549 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SPTA1P02549 SNORD113.2-201ENST00000364166 89 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SPTA1P02549 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 NCLP2-201ENST00000416078 1462 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
SPTA1P02549 ARL2BPP10-201ENST00000446487 531 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 SLC25A18P1-201ENST00000449385 454 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 AC024451.1-201ENST00000508013 779 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 RN7SKP98-201ENST00000517070 156 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 RNU1-45P-201ENST00000517191 141 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.56□□□□□ -1.68
SPTA1P02549 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.56□□□□□ -1.68
SPTA1P02549 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.56□□□□□ -1.68
SPTA1P02549 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.56□□□□□ -1.68
SPTA1P02549 AC009027.1-201ENST00000604510 479 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 AL160281.1-201ENST00000605307 311 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 AL121890.3-201ENST00000618494 516 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.56□□□□□ -1.68
SPTA1P02549 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SPTA1P02549 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
SPTA1P02549 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 AC110373.1-201ENST00000505994 3505 ntBASIC4.56□□□□□ -1.68
SPTA1P02549 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SPTA1P02549 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SPTA1P02549 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPTA1P02549 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPTA1P02549 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPTA1P02549 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SPTA1P02549 RNA5SP317-201ENST00000410176 116 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 RNA5SP311-201ENST00000411290 116 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 GAPDHP49-201ENST00000421421 961 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 KRT8P51-201ENST00000438938 274 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.55□□□□□ -1.68
SPTA1P02549 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 AC098976.1-201ENST00000513014 541 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 RNA5SP315-201ENST00000516340 116 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 RNA5SP312-201ENST00000517068 116 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.55□□□□□ -1.68
SPTA1P02549 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.55□□□□□ -1.68
SPTA1P02549 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 AC244100.1-202ENST00000621554 382 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC087821.1-201ENST00000623639 567 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC112200.1-201ENST00000625015 234 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SPTA1P02549 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 AC079298.1-201ENST00000625026 1619 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 AL034549.2-201ENST00000618285 3373 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.55□□□□□ -1.68
SPTA1P02549 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 AF186996.5-201ENST00000418098 904 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 OR7E125P-201ENST00000443450 846 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.55□□□□□ -1.68
SPTA1P02549 TCEA1P1-201ENST00000449716 880 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC073073.1-201ENST00000493920 463 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC006499.6-201ENST00000511169 607 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.55□□□□□ -1.68
SPTA1P02549 PMS2P3-207ENST00000529061 717 ntBASIC4.55□□□□□ -1.68
SPTA1P02549 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.55□□□□□ -1.68
SPTA1P02549 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
SPTA1P02549 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SPTA1P02549 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms