Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HSPA8P18-201ENST00000439846 1928 ntBASIC6.18□□□□□ -1.42
MBD4O95243 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MBD4O95243 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MBD4O95243 AL138820.1-201ENST00000617901 5305 ntBASIC6.18□□□□□ -1.42
MBD4O95243 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.18□□□□□ -1.42
MBD4O95243 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
MBD4O95243 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.18□□□□□ -1.42
MBD4O95243 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 AC007342.7-201ENST00000624610 2337 ntBASIC6.17□□□□□ -1.42
MBD4O95243 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 SNORA11B-201ENST00000408175 129 ntBASIC6.17□□□□□ -1.42
MBD4O95243 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.17□□□□□ -1.42
MBD4O95243 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 AC092647.3-201ENST00000443044 633 ntBASIC6.17□□□□□ -1.42
MBD4O95243 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.17□□□□□ -1.42
MBD4O95243 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.17□□□□□ -1.42
MBD4O95243 NPM1P28-201ENST00000492269 840 ntBASIC6.17□□□□□ -1.42
MBD4O95243 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.17□□□□□ -1.42
MBD4O95243 AC097173.1-201ENST00000505862 819 ntBASIC6.17□□□□□ -1.42
MBD4O95243 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.17□□□□□ -1.42
MBD4O95243 AC034244.2-201ENST00000514668 858 ntBASIC6.17□□□□□ -1.42
MBD4O95243 RN7SKP147-201ENST00000517154 244 ntBASIC6.17□□□□□ -1.42
MBD4O95243 RNU6-889P-201ENST00000517189 103 ntBASIC6.17□□□□□ -1.42
MBD4O95243 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.17□□□□□ -1.42
MBD4O95243 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 AC122134.1-201ENST00000565664 1104 ntBASIC6.17□□□□□ -1.42
MBD4O95243 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.17□□□□□ -1.42
MBD4O95243 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.17□□□□□ -1.42
MBD4O95243 BNIP3P35-201ENST00000604530 490 ntBASIC6.17□□□□□ -1.42
MBD4O95243 AL627230.1-201ENST00000613077 211 ntBASIC6.17□□□□□ -1.42
MBD4O95243 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 AL591926.8-201ENST00000616876 211 ntBASIC6.17□□□□□ -1.42
MBD4O95243 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 GVINP1-202ENST00000531871 7271 ntBASIC6.17□□□□□ -1.42
MBD4O95243 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.17□□□□□ -1.42
MBD4O95243 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
MBD4O95243 OR9K1P-202ENST00000641111 3217 ntBASIC6.16□□□□□ -1.42
MBD4O95243 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
MBD4O95243 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
MBD4O95243 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
MBD4O95243 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 RNA5SP223-201ENST00000365174 120 ntBASIC6.16□□□□□ -1.42
MBD4O95243 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.16□□□□□ -1.42
MBD4O95243 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.16□□□□□ -1.42
MBD4O95243 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.16□□□□□ -1.42
MBD4O95243 HSPD1P12-201ENST00000429127 1069 ntBASIC6.16□□□□□ -1.42
MBD4O95243 AC093716.1-201ENST00000435923 377 ntBASIC6.16□□□□□ -1.42
MBD4O95243 RPL34P20-201ENST00000442771 351 ntBASIC6.16□□□□□ -1.42
MBD4O95243 CEACAMP7-201ENST00000444105 496 ntBASIC6.16□□□□□ -1.42
MBD4O95243 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.16□□□□□ -1.42
MBD4O95243 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.16□□□□□ -1.42
MBD4O95243 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 MIR4443-201ENST00000585052 53 ntBASIC6.16□□□□□ -1.42
MBD4O95243 AC093799.2-201ENST00000610062 578 ntBASIC6.16□□□□□ -1.42
MBD4O95243 AC074140.1-201ENST00000621617 208 ntBASIC6.16□□□□□ -1.42
MBD4O95243 CASC19-222ENST00000641321 1173 ntBASIC6.16□□□□□ -1.42
MBD4O95243 UGT2B26P-201ENST00000508672 1613 ntBASIC6.16□□□□□ -1.42
MBD4O95243 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.16□□□□□ -1.42
MBD4O95243 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MBD4O95243 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
MBD4O95243 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
MBD4O95243 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
MBD4O95243 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.15□□□□□ -1.42
MBD4O95243 THAP12P4-201ENST00000528321 2266 ntBASIC6.15□□□□□ -1.42
MBD4O95243 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MBD4O95243 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MBD4O95243 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MBD4O95243 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
MBD4O95243 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.15□□□□□ -1.42
MBD4O95243 RNA5SP455-201ENST00000365190 119 ntBASIC6.15□□□□□ -1.42
MBD4O95243 CCNB2P1-201ENST00000399411 1150 ntBASIC6.15□□□□□ -1.42
MBD4O95243 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
MBD4O95243 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.15□□□□□ -1.42
MBD4O95243 DDX39BP1-205ENST00000422507 192 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms