Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SIAH1P1-201ENST00000479411 923 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC099521.1-201ENST00000482557 334 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC108693.1-201ENST00000496068 432 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 IGLV2-28-201ENST00000520681 304 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 HMGB1P42-201ENST00000532126 553 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 NPM1P35-201ENST00000533043 868 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC135279.1-201ENST00000543493 504 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC091515.1-201ENST00000548110 679 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AL049830.4-201ENST00000555149 351 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 AL163952.1-202ENST00000569625 600 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 ZNF92P3-201ENST00000596594 954 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC145423.1-201ENST00000605712 336 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AL021707.7-201ENST00000607991 416 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 VN1R9P-201ENST00000614184 867 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC015712.7-201ENST00000615211 635 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 CU639417.4-201ENST00000623928 207 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AP003485.1-201ENST00000625093 753 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM38O00635 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM38O00635 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 AC234772.1-201ENST00000377927 937 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 OR6E1P-201ENST00000414424 923 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 UBE2V1P9-201ENST00000414760 368 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC115285.1-201ENST00000424879 736 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 CYCSP51-201ENST00000443545 318 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 AL133244.1-201ENST00000456007 258 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 RN7SL799P-201ENST00000475891 298 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 RN7SL184P-201ENST00000488308 297 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 IMPA1P1-201ENST00000510718 842 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 RNU6-615P-201ENST00000516065 106 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 RNA5SP34-201ENST00000516887 130 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM38O00635 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 AP003066.2-201ENST00000529375 555 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM38O00635 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AL358913.1-201ENST00000554342 121 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 DPPA2P4-201ENST00000563717 878 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 RBM22P12-201ENST00000567098 1255 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM38O00635 TXNP4-201ENST00000575018 310 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 MTATP6P24-201ENST00000576835 677 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC016839.1-201ENST00000578162 867 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC009974.1-201ENST00000608881 455 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AL139099.4-201ENST00000614802 114 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 OR4G3P-201ENST00000633500 913 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AL356118.1-201ENST00000635272 1078 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 AC099654.9-201ENST00000637055 678 ntBASIC5.72□□□□□ -1.49
TRIM38O00635 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM38O00635 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms