Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 TCEA1P2-201ENST00000420496 906 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC093084.1-201ENST00000424233 687 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 HMGN2P27-201ENST00000427352 270 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 MTND6P12-201ENST00000428247 522 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AP000281.1-201ENST00000444036 316 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 GAPDHP25-201ENST00000447061 1001 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RPS26P41-201ENST00000450370 284 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RPL5P13-201ENST00000462840 709 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 RPL21P47-201ENST00000483696 477 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC096571.1-202ENST00000506634 735 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC133963.2-201ENST00000513686 578 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC010376.1-201ENST00000522101 334 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL049838.1-201ENST00000563647 981 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC106734.1-201ENST00000568646 663 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC005341.1-201ENST00000571086 708 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 FAM106CP-201ENST00000582212 507 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC068020.1-201ENST00000594215 661 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC130352.1-201ENST00000602979 661 ntBASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TCRBV7S3A2A0A539 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC023421.1-201ENST00000590535 1785 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR9K1P-201ENST00000326513 941 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RNU5E-10P-201ENST00000363506 118 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 Z68694.1-201ENST00000413929 841 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 UBE2V1P9-201ENST00000414760 368 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 Z93019.1-201ENST00000416450 973 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC241520.1-201ENST00000422654 1099 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 MTCO1P43-201ENST00000431831 488 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RPS27P5-201ENST00000444247 244 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RPL6P5-201ENST00000445678 828 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC073909.1-201ENST00000447112 999 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC104164.3-201ENST00000467363 1258 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RPL35AP19-201ENST00000469425 329 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR11I1P-201ENST00000486033 954 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AL049874.2-201ENST00000492636 288 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 UGT2A3P7-201ENST00000510485 734 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC022360.1-201ENST00000521058 340 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR7E13P-201ENST00000526052 910 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC010503.3-201ENST00000594355 540 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC069431.2-201ENST00000604149 1099 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-1192P-201ENST00000612197 107 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 RNU6-489P-201ENST00000618289 107 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC084824.4-201ENST00000620106 731 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AP000770.2-201ENST00000623694 100 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 MIR1910-201ENST00000636955 80 ntBASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
TCRBV7S3A2A0A539 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 336.1 ms