Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SCARNA22-201ENST00000503991 125 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 BUD31P1-201ENST00000521828 359 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 SOX5P1-201ENST00000524155 1127 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AGGF1P9-201ENST00000561884 913 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL121932.1-201ENST00000605542 214 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AL022394.1-201ENST00000606979 292 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AP003072.5-201ENST00000623872 773 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 CCAT2-201ENST00000630920 1752 ntBASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMIM28A0A1B0GU29 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MFSD8-216ENST00000641147 4009 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 RNA5SP443-201ENST00000363083 132 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MIR192-201ENST00000384915 110 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 RNU2-50P-201ENST00000410494 143 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 Y_RNA.625-201ENST00000411256 107 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 BX510359.2-201ENST00000417920 305 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 CYCSP24-201ENST00000445119 316 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AC073264.2-201ENST00000448886 166 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AC021660.1-201ENST00000465006 554 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 Y_RNA.719-201ENST00000517156 106 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AP006289.1-201ENST00000538089 277 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MIR4330-201ENST00000579077 105 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AC023389.2-201ENST00000580031 955 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 SNORA74C-1-201ENST00000580726 201 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AL161912.3-201ENST00000605404 628 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AL133406.3-201ENST00000606817 541 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MIR6853-201ENST00000619642 74 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SMIM28A0A1B0GU29 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.21□□□□□ -1.57
SMIM28A0A1B0GU29 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SMIM28A0A1B0GU29 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF402P-201ENST00000404435 3100 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 NPM1P40-201ENST00000412758 733 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC009506.2-201ENST00000420635 840 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AL138878.2-201ENST00000440581 1241 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC011753.3-201ENST00000443436 406 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 MRPL35P2-201ENST00000448009 511 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC108751.3-201ENST00000461814 1020 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL558P-201ENST00000497468 299 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC105031.1-201ENST00000518550 476 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 RPL23AP53-201ENST00000521854 457 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC133555.2-201ENST00000550213 292 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 RN7SL802P-201ENST00000577858 299 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 BX005214.3-202ENST00000619809 325 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AL353684.1-201ENST00000622677 1120 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.21□□□□□ -1.58
SMIM28A0A1B0GU29 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms