Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 OFD1P3Y-201ENST00000453312 783 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC118282.1-201ENST00000506408 765 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 OR8A2P-201ENST00000528631 952 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 OR8K4P-201ENST00000534608 872 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL132857.1-201ENST00000555180 708 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC012146.2-201ENST00000576545 416 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL160237.3-201ENST00000604114 1013 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AL138960.1-201ENST00000613838 513 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC023509.5-201ENST00000617434 807 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 AC017104.5-201ENST00000637647 639 ntBASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL4A3BPQ9Y5P4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 TRIM51GP-201ENST00000534741 1350 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 MRPL53P1-201ENST00000414323 319 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 TAF13P2-201ENST00000416876 286 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AK4P4-201ENST00000419465 646 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AL391987.1-201ENST00000441025 200 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 TPTE2P6-202ENST00000445572 1007 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AL009048.1-201ENST00000450437 298 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 TPMTP4-201ENST00000450749 678 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC244505.3-201ENST00000454598 187 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC026782.2-201ENST00000510845 636 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC078899.1-201ENST00000521432 1185 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 VN1R88P-201ENST00000596787 292 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 BNIP3P4-201ENST00000604946 565 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 MIR6862-1-201ENST00000613016 70 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 VN1R74P-201ENST00000613259 503 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 MIR6862-2-201ENST00000614755 70 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AL035461.2-201ENST00000619201 524 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AC016717.3-201ENST00000624730 554 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AL121594.5-201ENST00000631724 573 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 OR11H2-202ENST00000641517 1085 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 BX649567.1-201ENST00000642071 1134 ntBASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL4A3BPQ9Y5P4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 OR13C1P-202ENST00000641378 2919 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 FUNDC2P3-201ENST00000334716 533 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms