Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CCT8P1-201ENST00000413611 1657 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 RNU11-201ENST00000387069 134 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 SNORA11F-201ENST00000408237 128 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 LINC01881-201ENST00000416103 412 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 RPL12P34-201ENST00000424532 479 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AL732292.1-201ENST00000426692 226 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 CEACAMP6-201ENST00000452007 574 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 RNA5SP464-201ENST00000516251 108 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AC138701.1-201ENST00000524329 714 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AP005119.2-201ENST00000579735 1105 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AL360012.1-201ENST00000602813 131 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AC007497.1-201ENST00000610421 561 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AC024941.1-201ENST00000612250 334 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 AL122126.1-201ENST00000546905 1318 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.29□□□□□ -1.24
SHANK2Q9UPX8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 VN1R37P-201ENST00000419096 748 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AL451062.2-201ENST00000427515 271 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 OR52E3P-201ENST00000452083 936 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 CDV3-208ENST00000511392 554 ntTSL 5 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AC106785.1-201ENST00000565935 262 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 MIR4429-201ENST00000580105 73 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 AC022726.1-201ENST00000587475 207 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 FAM27B-201ENST00000610601 213 ntBASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SHANK2Q9UPX8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 IGKV7-3-201ENST00000357453 298 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 RN7SKP106-201ENST00000410832 272 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 ATG4AP1-201ENST00000416893 538 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AC073052.1-201ENST00000440417 714 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AC009951.1-201ENST00000623674 2614 ntBASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHANK2Q9UPX8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 TRGV7-201ENST00000427089 353 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AC006946.1-201ENST00000429106 328 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AC023141.6-201ENST00000429418 337 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AL136455.1-201ENST00000441083 1240 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 RPL36AP41-201ENST00000493820 306 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 HNRNPRP2-201ENST00000528421 743 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AP000619.2-201ENST00000546014 969 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AC008782.1-201ENST00000603386 430 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 OR8B1P-202ENST00000641132 1178 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 AL137058.3-201ENST00000624531 3099 ntBASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SHANK2Q9UPX8 TRIM51GP-201ENST00000534741 1350 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 OR56B2P-202ENST00000641377 2453 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 SNORD113.2-201ENST00000364166 89 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC025750.1-201ENST00000399891 379 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms