Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC005294.1-201ENST00000355509 281 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RNU6-618P-201ENST00000363518 112 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 BMS1P3-201ENST00000372011 932 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RNU6-178P-201ENST00000384631 104 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 MIR7-1-201ENST00000384871 110 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RNU6-564P-201ENST00000410983 104 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RPS26P13-201ENST00000419030 330 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 OR6C64P-201ENST00000419708 825 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC093655.2-201ENST00000425735 631 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RPL7L1P9-201ENST00000431298 745 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 MTND2P2-201ENST00000434633 945 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 EIF2S2P4-201ENST00000461070 984 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 OR2AO1P-201ENST00000476497 403 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RPL7P6-201ENST00000480903 738 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 RPL7L1P4-201ENST00000513004 707 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 ATP5LP3-201ENST00000514223 304 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 NPM1P35-201ENST00000533043 868 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL049779.2-201ENST00000553847 315 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC127024.5-201ENST00000580085 462 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL162431.4-201ENST00000604674 411 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 BNIP3P7-201ENST00000605641 516 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AL139407.1-201ENST00000613826 1175 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC136428.4-201ENST00000634254 1155 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC004817.4-201ENST00000602396 3625 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 AC112198.2-201ENST00000426589 6996 ntBASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CHRNA9Q9UGM1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.65
CHRNA9Q9UGM1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RNA5SP183-201ENST00000362452 119 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 MIR589-201ENST00000385238 99 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 CFL1P1-202ENST00000432948 411 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AL161722.2-201ENST00000434731 981 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 FHP1-201ENST00000442741 703 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 TCEA1P3-201ENST00000443005 880 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 PPIAP20-201ENST00000449839 135 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RPL10P17-201ENST00000453852 316 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC021205.1-201ENST00000468797 348 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RPL21P6-201ENST00000479171 504 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 RNA5SP373-201ENST00000517271 95 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC069307.1-201ENST00000602820 447 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 IMMP1LP3-201ENST00000604197 224 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC011626.1-201ENST00000604710 562 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 CYP4F35P-202ENST00000636121 390 ntBASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.77□□□□□ -1.65
CHRNA9Q9UGM1 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms