Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RN7SL319P-201ENST00000480656 221 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AC090142.2-201ENST00000483263 416 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 RN7SL97P-201ENST00000486780 299 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 DPRXP4-201ENST00000578053 568 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 MIR4489-201ENST00000578869 62 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 SUMO2P15-201ENST00000604285 278 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AL627230.1-201ENST00000613077 211 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 OR8G7P-201ENST00000616658 848 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 AL591926.8-201ENST00000616876 211 ntBASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS29Q9UBQ0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 RNU6-171P-201ENST00000384354 107 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 SNORA11.3-201ENST00000408471 128 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AF186996.5-201ENST00000418098 904 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 OR6C64P-201ENST00000419708 825 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 HSPE1P16-201ENST00000426640 348 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 PPIAP20-201ENST00000449839 135 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AC020890.1-201ENST00000491837 504 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AC093799.2-201ENST00000610062 578 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AL356752.1-201ENST00000615844 593 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 SNORA11.6-201ENST00000619030 128 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AL353662.3-201ENST00000625131 237 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 LINC01739-205ENST00000641890 573 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 CASC19-206ENST00000641028 1430 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 AL034370.1-201ENST00000397254 1590 ntBASIC4.7□□□□□ -1.66
VPS29Q9UBQ0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AL590763.1-201ENST00000398297 1545 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MTHFD2P5-201ENST00000320415 844 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 RNA5SP428-201ENST00000365129 132 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 RNA5SP296-201ENST00000410523 111 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 SETP15-201ENST00000412724 337 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 BMS1P13-201ENST00000417301 885 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 RPL36AP10-201ENST00000421785 322 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 EIF4HP2-201ENST00000424380 563 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MRPL48P1-201ENST00000445390 636 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 OR11I1P-201ENST00000486033 954 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AP000859.1-201ENST00000525536 307 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AP005262.1-201ENST00000582646 997 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 MIR4691-201ENST00000583764 85 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC006116.3-201ENST00000592968 361 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.69□□□□□ -1.66
VPS29Q9UBQ0 AC012414.7-202ENST00000622705 1090 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms