Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RN7SL208P-201ENST00000577964 296 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 FAM106CP-201ENST00000582212 507 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 AP005262.1-201ENST00000582646 997 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 AC063977.7-201ENST00000594454 337 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 AC015871.2-201ENST00000603605 948 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 MIR6780B-201ENST00000610307 79 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.1□□□□□ -1.27
CNTN3Q9P232 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
CNTN3Q9P232 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CNTN3Q9P232 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 Y_RNA.70-201ENST00000362886 110 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 Y_RNA.302-201ENST00000364997 102 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC099535.1-201ENST00000408928 371 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 RPS21P8-201ENST00000413365 247 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC245054.1-201ENST00000420944 258 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL109913.1-201ENST00000421173 514 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 USP12PX-201ENST00000432383 1057 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC093716.1-201ENST00000435923 377 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 NANOGNBP1-201ENST00000448444 480 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 DYNLL1P6-201ENST00000503440 264 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC083906.1-201ENST00000509298 406 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 RNU6-314P-201ENST00000516574 104 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL133399.1-201ENST00000527476 298 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC011453.2-201ENST00000603737 729 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL157899.1-201ENST00000604110 936 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AP000860.1-201ENST00000605250 559 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC019257.2-201ENST00000605539 497 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC006566.1-201ENST00000608943 513 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL359091.2-201ENST00000609303 556 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC007742.2-201ENST00000618226 398 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC006840.1-201ENST00000623069 542 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 CR381653.2-201ENST00000624041 768 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 LYARP1-201ENST00000436977 1501 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CNTN3Q9P232 Z99496.1-201ENST00000469424 1477 ntBASIC7.09□□□□□ -1.27
CNTN3Q9P232 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.09□□□□□ -1.27
CNTN3Q9P232 AC125238.2-201ENST00000430003 1440 ntBASIC7.09□□□□□ -1.28
CNTN3Q9P232 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.09□□□□□ -1.28
CNTN3Q9P232 AC106872.5-201ENST00000508856 1416 ntBASIC7.09□□□□□ -1.28
CNTN3Q9P232 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CNTN3Q9P232 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
CNTN3Q9P232 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CNTN3Q9P232 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
CNTN3Q9P232 PRNCR1-201ENST00000635449 12727 ntBASIC7.08□□□□□ -1.28
CNTN3Q9P232 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
CNTN3Q9P232 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms