Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HSFY3P-201ENST00000444242 1191 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 MRPL35P2-201ENST00000448009 511 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTA1Q9NP79 VDAC2P4-201ENST00000452925 711 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 RPL7P32-201ENST00000457119 744 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 CR383656.1-201ENST00000484916 377 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 RNA5SP303-201ENST00000516192 130 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 MRPS36P5-201ENST00000551909 298 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 OR11H3P-201ENST00000554547 982 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC004825.1-201ENST00000555068 586 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.4□□□□□ -1.38
VTA1Q9NP79 AL049844.2-201ENST00000604280 628 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 Z99289.3-201ENST00000605586 594 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC024060.1-201ENST00000607052 494 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC241377.1-201ENST00000619797 406 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC090897.3-201ENST00000636973 1157 ntBASIC6.4□□□□□ -1.38
VTA1Q9NP79 AC109780.1-201ENST00000451768 1344 ntBASIC6.4□□□□□ -1.39
VTA1Q9NP79 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VTA1Q9NP79 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 AC011504.1-201ENST00000623331 4103 ntBASIC6.4□□□□□ -1.39
VTA1Q9NP79 AL133268.1-201ENST00000405676 1401 ntBASIC6.4□□□□□ -1.39
VTA1Q9NP79 MFSD8-220ENST00000641243 1422 ntBASIC6.4□□□□□ -1.39
VTA1Q9NP79 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
VTA1Q9NP79 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VTA1Q9NP79 UGT2B26P-201ENST00000508672 1613 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 METTL21EP-201ENST00000298105 713 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 ANKRD36P1-201ENST00000344424 659 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 RNA5SP183-201ENST00000362452 119 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 SNORA74A-201ENST00000364089 198 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 SNORA70H-201ENST00000383910 135 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 SNORA70J-201ENST00000384182 135 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AP002530.1-201ENST00000405705 684 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 RNA5SP498-201ENST00000411342 120 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC023128.2-201ENST00000420880 1223 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC007394.1-201ENST00000421941 531 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 FO393419.3-201ENST00000428741 282 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 CLUHP1-201ENST00000435012 1190 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 OSTCP1-201ENST00000455507 450 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AL445687.2-201ENST00000458156 728 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AL355032.1-201ENST00000472981 438 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 HPRT1P1-201ENST00000509498 657 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC112673.1-201ENST00000513168 575 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 RN7SKP248-201ENST00000516278 305 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 RNA5SP92-201ENST00000516437 110 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 HMGB1P1-201ENST00000522557 636 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC104417.1-201ENST00000523974 751 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC044860.2-201ENST00000561005 179 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC006115.2-201ENST00000596823 202 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC012616.1-201ENST00000600294 197 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC008536.1-201ENST00000602872 669 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AP004607.9-201ENST00000618202 316 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 AL121890.3-201ENST00000618494 516 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 SAMMSON-209ENST00000641222 1100 ntBASIC6.39□□□□□ -1.39
VTA1Q9NP79 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VTA1Q9NP79 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.39□□□□□ -1.39
VTA1Q9NP79 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms