Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC005034.4-201ENST00000603612 899 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AL445435.1-201ENST00000604232 665 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC021851.1-201ENST00000608537 1082 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC010632.3-201ENST00000611377 369 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AC138965.3-201ENST00000623875 498 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 OR5AC4P-202ENST00000642086 985 ntBASIC5.71□□□□□ -1.5
USP29Q9HBJ7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP29Q9HBJ7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC079097.1-201ENST00000512187 1399 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 RNU5E-10P-201ENST00000363506 118 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 TAF9BP2-201ENST00000400856 499 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 NPM1P4-201ENST00000414095 812 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AL596448.1-201ENST00000415024 392 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 Z93019.1-201ENST00000416450 973 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 GLUD1P9-201ENST00000420997 1173 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AL355433.1-201ENST00000422804 300 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC006994.1-201ENST00000438212 839 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC073465.2-201ENST00000440938 498 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 SIAH1P1-201ENST00000479411 923 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC087672.1-201ENST00000479876 766 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC012123.2-201ENST00000485809 248 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 SNORA43.3-201ENST00000517240 103 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 NRBF2P4-201ENST00000520874 850 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC023825.1-201ENST00000566704 1030 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AGGF1P5-201ENST00000567900 919 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 H3F3BP2-201ENST00000583907 357 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AP001160.4-201ENST00000596971 382 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 BNIP3P32-201ENST00000600015 554 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC124016.2-201ENST00000610058 665 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AL162574.1-201ENST00000615702 950 ntBASIC5.7□□□□□ -1.5
USP29Q9HBJ7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP29Q9HBJ7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC006484.1-201ENST00000435086 1884 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 MT-RNR2-201ENST00000387347 1559 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RAD1P1-201ENST00000231383 813 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC092681.1-201ENST00000297369 291 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RN7SKP162-201ENST00000363605 345 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RN7SKP124-201ENST00000364730 341 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AP000534.2-201ENST00000412729 568 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 SSR1P2-201ENST00000415208 787 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC005297.1-201ENST00000444765 862 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC044797.1-201ENST00000445744 679 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC069277.2-201ENST00000454211 432 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AL133445.1-201ENST00000467051 452 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms