Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 MRPS21P7-201ENST00000566937 238 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM4Q9C037 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM4Q9C037 AC027228.2-201ENST00000567141 2154 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM4Q9C037 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM4Q9C037 OR1L6-202ENST00000373684 1044 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 RPS24P12-201ENST00000402084 394 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 PCNPP4-201ENST00000414817 517 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 RIMKLBP2-201ENST00000424737 654 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 CYCSP24-201ENST00000445119 316 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 AL035090.1-201ENST00000454835 332 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 RPL7P45-201ENST00000455851 743 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 LDHBP2-201ENST00000456969 1005 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 PSAT1P4-201ENST00000466500 526 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM4Q9C037 RN7SL459P-201ENST00000481078 302 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 HMGB3P16-201ENST00000508037 287 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC130364.2-201ENST00000528639 604 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 PMS2P3-207ENST00000529061 717 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 MIR3934-201ENST00000579806 107 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 AC073869.10-201ENST00000642016 354 ntBASIC5.23□□□□□ -1.57
TRIM4Q9C037 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TRIM4Q9C037 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC005294.1-201ENST00000355509 281 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AL009179.1-201ENST00000406085 265 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 RPL12P9-201ENST00000412942 488 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC093162.1-201ENST00000419682 124 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AL360081.1-201ENST00000428299 555 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC073465.2-201ENST00000440938 498 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AL031584.1-201ENST00000447169 754 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 RN7SKP46-201ENST00000515942 234 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 NRBF2P4-201ENST00000520874 850 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AL008729.2-201ENST00000606393 473 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 MIPEPP2-201ENST00000422560 1819 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC100757.1-201ENST00000616872 1835 ntBASIC5.22□□□□□ -1.57
TRIM4Q9C037 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM4Q9C037 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM4Q9C037 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM4Q9C037 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM4Q9C037 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM4Q9C037 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
TRIM4Q9C037 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
TRIM4Q9C037 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
TRIM4Q9C037 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM4Q9C037 RNA5SP305-201ENST00000362665 119 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 PPIAP9-201ENST00000403866 498 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.21□□□□□ -1.58
TRIM4Q9C037 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms