Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 RNA5SP46-201ENST00000362370 120 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 RPL23AP48-201ENST00000406913 488 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 TNPO1P1-201ENST00000423641 1138 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 CLNS1AP1-201ENST00000435954 682 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC019185.1-201ENST00000442718 389 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 BTF3P6-201ENST00000448054 499 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC104634.1-201ENST00000452720 462 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC010469.1-201ENST00000463864 576 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC104339.1-201ENST00000465478 348 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC005412.2-201ENST00000492004 341 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 EIF4E2P2-201ENST00000492033 736 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 RPS6P4-201ENST00000494693 758 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 RPEP1-201ENST00000504507 658 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MTCYBP19-201ENST00000517463 1124 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC011853.1-201ENST00000518911 454 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 NDUFB4P11-201ENST00000560510 395 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MYLK-221ENST00000583087 678 ntTSL 4 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC108359.1-201ENST00000616451 1211 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL591926.1-201ENST00000620542 217 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AL023881.1-201ENST00000621088 301 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 MIR6813-201ENST00000621638 56 ntBASIC3.75□□□□□ -1.81
AP1S3Q96PC3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
AP1S3Q96PC3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC108751.5-201ENST00000492880 1336 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC023490.2-201ENST00000359859 470 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNA5SP319-201ENST00000362768 119 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RN7SKP171-201ENST00000364417 303 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNA5SP433-201ENST00000364491 114 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 SNORA16A-201ENST00000384342 137 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-1320P-201ENST00000390838 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-1269P-201ENST00000391139 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AL133388.1-201ENST00000404509 287 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AL512430.2-201ENST00000406786 339 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AL139039.2-201ENST00000407436 479 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 HMGN1P20-201ENST00000411849 300 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC066692.1-201ENST00000421721 457 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 PDSS1P1-201ENST00000422953 1114 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AL662874.1-201ENST00000426065 230 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AL139148.1-201ENST00000427122 680 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RPS29P10-201ENST00000439197 166 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-599P-201ENST00000459383 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-1193P-201ENST00000459461 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RN7SL41P-201ENST00000476144 297 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 IRF5P1-201ENST00000504852 2164 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC112184.1-201ENST00000505179 312 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms