Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 RBM22P1-201ENST00000578589 1214 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 RN7SL339P-201ENST00000580597 296 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL512427.1-201ENST00000618593 349 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AP001002.2-201ENST00000625137 386 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL121950.1-201ENST00000624993 2077 ntBASIC5.58□□□□□ -1.52
HMGB4Q8WW32 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.58□□□□□ -1.52
HMGB4Q8WW32 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 MIR133B-201ENST00000362210 119 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SNORA67-201ENST00000384423 137 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 RNA5SP339-201ENST00000390987 122 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AP002784.2-201ENST00000397300 549 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 GAPDHP15-201ENST00000398586 975 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC106883.1-201ENST00000418805 562 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 TCEA1P2-201ENST00000420496 906 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL590762.4-201ENST00000425885 253 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL365220.1-201ENST00000432923 399 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 RPS7P2-201ENST00000435134 607 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL161722.1-201ENST00000446972 1032 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL035090.1-201ENST00000454835 332 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 HMGB1P38-201ENST00000490557 577 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC010374.1-201ENST00000503762 1237 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 TOMM22P4-201ENST00000511318 336 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 OR11J2P-201ENST00000555298 907 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL135786.2-201ENST00000608422 615 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 RNU6-1192P-201ENST00000612197 107 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL138960.1-201ENST00000613838 513 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL356274.1-201ENST00000617064 410 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 RNU6-489P-201ENST00000618289 107 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC084824.4-201ENST00000620106 731 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC006927.2-201ENST00000639256 389 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 ZNF733P-202ENST00000444809 1573 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC007938.2-201ENST00000604666 2634 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AC144833.1-201ENST00000567953 4089 ntBASIC5.57□□□□□ -1.52
HMGB4Q8WW32 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMGB4Q8WW32 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 U3.2-201ENST00000362981 210 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 SNORD1C-201ENST00000363315 78 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC234772.1-201ENST00000377927 937 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 MIR550A3-201ENST00000390735 95 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RNA5SP91-201ENST00000390902 119 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL133270.1-201ENST00000402635 279 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL009179.1-201ENST00000406085 265 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 SNORA79B-201ENST00000410557 148 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC096533.1-201ENST00000411645 353 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 UBE2V1P9-201ENST00000414760 368 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC108075.1-201ENST00000424692 529 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 CRIP1P1-201ENST00000427567 185 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC005189.1-201ENST00000431286 310 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms