Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.57□□□□□ -1.36
SYNE4Q8N205 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SYNE4Q8N205 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL669831.5-218ENST00000591702 1873 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 RNU6-386P-201ENST00000362650 107 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL078599.1-201ENST00000402075 293 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 MTCO2P8-201ENST00000412213 658 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 COX6B1P1-201ENST00000415962 213 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC023141.6-201ENST00000429418 337 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 NDUFB4P8-201ENST00000435351 367 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 H3F3BP1-201ENST00000440551 403 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC073465.2-201ENST00000440938 498 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC011753.3-201ENST00000443436 406 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC097484.1-201ENST00000471148 389 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC108729.2-201ENST00000476543 840 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 RPL7P40-201ENST00000481703 745 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 MTCYBP35-201ENST00000503630 1137 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC005351.1-201ENST00000511152 786 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC023538.1-201ENST00000534576 736 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC008033.2-201ENST00000542626 177 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 YWHAZP1-201ENST00000556286 722 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AL078595.3-201ENST00000623815 1166 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC026422.1-201ENST00000623961 452 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 MIR7641-1-201ENST00000627518 61 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 AC239868.2-201ENST00000564237 4527 ntBASIC6.56□□□□□ -1.36
SYNE4Q8N205 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SYNE4Q8N205 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.56□□□□□ -1.36
SYNE4Q8N205 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 Y_RNA.62-201ENST00000362840 99 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 RNA5SP90-201ENST00000364801 99 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL139039.2-201ENST00000407436 479 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL590139.1-201ENST00000416267 400 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 OR2AM1P-201ENST00000422137 422 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 MORF4L1P7-201ENST00000426038 703 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC083899.1-201ENST00000454465 3819 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 RN7SKP248-201ENST00000516278 305 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 EEF1A1P37-201ENST00000522748 715 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC113192.3-201ENST00000529152 742 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC084759.1-201ENST00000561168 290 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.55□□□□□ -1.36
SYNE4Q8N205 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC013444.2-201ENST00000603317 787 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 ELOCP35-201ENST00000604289 336 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL162431.4-201ENST00000604674 411 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL451086.1-201ENST00000605596 223 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL121652.1-201ENST00000608851 448 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 PCA3_2.1-201ENST00000612507 409 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AC015712.7-201ENST00000615211 635 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 AL163051.2-201ENST00000618976 735 ntBASIC6.55□□□□□ -1.36
SYNE4Q8N205 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms