Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.8□□□□□ -1.48
GABPAQ06546 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.8□□□□□ -1.48
GABPAQ06546 AP001880.2-201ENST00000538233 448 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 NPM1P5-201ENST00000557228 838 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AC010424.2-201ENST00000607594 443 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AC239803.2-201ENST00000610161 430 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AL049794.2-201ENST00000616301 365 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AL022401.1-201ENST00000619498 108 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.8□□□□□ -1.48
GABPAQ06546 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
GABPAQ06546 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.79□□□□□ -1.48
GABPAQ06546 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.79□□□□□ -1.48
GABPAQ06546 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GABPAQ06546 RNU6-398P-201ENST00000384143 109 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 U3.30-201ENST00000391308 210 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 NPM1P40-201ENST00000412758 733 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 RSU1P3-201ENST00000412878 835 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 AC092570.3-201ENST00000420113 693 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 NRBF2P3-201ENST00000432731 865 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 CYCSP11-201ENST00000436426 315 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.79□□□□□ -1.48
GABPAQ06546 AC073264.2-201ENST00000448886 166 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 AC010733.1-201ENST00000451515 401 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.79□□□□□ -1.48
GABPAQ06546 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.79□□□□□ -1.48
GABPAQ06546 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.79□□□□□ -1.48
GABPAQ06546 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.79□□□□□ -1.48
GABPAQ06546 AC090589.1-201ENST00000473109 362 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.79□□□□□ -1.48
GABPAQ06546 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.79□□□□□ -1.48
GABPAQ06546 AP006289.1-201ENST00000538089 277 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
GABPAQ06546 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.79□□□□□ -1.48
GABPAQ06546 AP005901.4-201ENST00000577336 569 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GABPAQ06546 AL583832.1-201ENST00000603227 784 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 RNA5SP439-201ENST00000617595 124 ntBASIC5.79□□□□□ -1.48
GABPAQ06546 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
GABPAQ06546 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.79□□□□□ -1.48
GABPAQ06546 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GABPAQ06546 AC092451.3-201ENST00000625067 1343 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GABPAQ06546 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
GABPAQ06546 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GABPAQ06546 BX510359.2-201ENST00000417920 305 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 RANP7-201ENST00000418085 644 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AC245028.1-201ENST00000423259 256 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AL136231.1-201ENST00000429407 730 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AC005154.2-201ENST00000438110 379 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.78□□□□□ -1.48
GABPAQ06546 CBX1P2-201ENST00000453841 458 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.78□□□□□ -1.48
GABPAQ06546 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.78□□□□□ -1.48
GABPAQ06546 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.78□□□□□ -1.48
GABPAQ06546 AC100784.1-201ENST00000522790 310 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.78□□□□□ -1.48
GABPAQ06546 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GABPAQ06546 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.78□□□□□ -1.48
GABPAQ06546 AC079075.1-201ENST00000559543 878 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.78□□□□□ -1.48
GABPAQ06546 AP000346.3-201ENST00000622821 210 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 AP000550.3-201ENST00000637734 379 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 MUC2-202ENST00000613187 4845 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
GABPAQ06546 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GABPAQ06546 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GABPAQ06546 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.78□□□□□ -1.48
GABPAQ06546 AP001029.2-203ENST00000589795 4910 ntBASIC5.78□□□□□ -1.48
GABPAQ06546 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GABPAQ06546 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 NCLP2-201ENST00000416078 1462 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
GABPAQ06546 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
GABPAQ06546 RNA5SP505-201ENST00000364748 108 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 FAR2P2-201ENST00000413041 594 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 SETP9-201ENST00000423837 832 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 FAR2P4-202ENST00000425399 584 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 OR2B7P-201ENST00000429302 934 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 RPL5P2-201ENST00000429598 854 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.77□□□□□ -1.49
GABPAQ06546 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.77□□□□□ -1.49
GABPAQ06546 OR1H1P-201ENST00000448731 937 ntBASIC5.77□□□□□ -1.49
GABPAQ06546 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms