Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 IGBP1P5-201ENST00000507524 1000 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC006499.4-201ENST00000510947 694 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX6-1P78426 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 MTCO1P47-201ENST00000523889 1271 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 MTND2P26-201ENST00000528255 1029 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC092747.2-201ENST00000545069 983 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC079905.1-201ENST00000549280 475 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC010198.2-201ENST00000550612 259 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 MTCYBP27-201ENST00000555160 670 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX6-1P78426 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX6-1P78426 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 MRPS21P8-201ENST00000569196 235 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 MIR4666A-201ENST00000580160 79 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX6-1P78426 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC069304.3-201ENST00000603938 1084 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC100767.2-201ENST00000604840 693 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AL133507.1-201ENST00000605269 557 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AP003392.5-201ENST00000607857 415 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AP005137.2-201ENST00000609238 400 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 AC092266.1-201ENST00000610958 165 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 FAM27E2-201ENST00000619668 403 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC009120.7-201ENST00000623452 780 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 AL592429.1-201ENST00000403909 1473 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
NKX6-1P78426 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX6-1P78426 TTC39DP-201ENST00000416781 1688 ntBASIC5.5□□□□□ -1.53
NKX6-1P78426 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.5□□□□□ -1.53
NKX6-1P78426 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NKX6-1P78426 AC016745.2-201ENST00000608834 3443 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 YES1P1-201ENST00000418510 1628 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 RNA5SP350-201ENST00000363298 111 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 Y_RNA.169-201ENST00000363745 96 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 RNU5A-2P-201ENST00000384337 116 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NKX6-1P78426 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL157702.1-201ENST00000398764 426 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 LYPLA1P3-201ENST00000402650 695 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL596448.1-201ENST00000415024 392 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 TRGV6-201ENST00000417928 299 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 MTCO3P21-201ENST00000430791 643 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC097463.1-201ENST00000447288 481 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC022431.1-201ENST00000450941 438 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 ART2BP-201ENST00000453501 499 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 RPL12P31-201ENST00000478433 450 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 BET1P1-201ENST00000482276 359 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC082651.2-201ENST00000496833 166 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC025458.1-201ENST00000506046 166 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 KHDC1P1-201ENST00000511053 508 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC093755.1-201ENST00000512950 1023 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 RNU6-416P-201ENST00000516265 103 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC087465.1-201ENST00000560574 245 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms