Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SLC25A36P1-201ENST00000590111 465 ntBASIC3.35□□□□□ -1.87
RPL39P62891 MIR6780B-201ENST00000610307 79 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AL359513.1-201ENST00000614364 557 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AC055839.1-201ENST00000634467 498 ntBASIC3.35□□□□□ -1.87
RPL39P62891 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.35□□□□□ -1.87
RPL39P62891 AC087190.4-201ENST00000574616 8334 ntBASIC3.35□□□□□ -1.87
RPL39P62891 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RPL39P62891 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPL39P62891 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC3.35□□□□□ -1.87
RPL39P62891 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.35□□□□□ -1.87
RPL39P62891 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.35□□□□□ -1.87
RPL39P62891 AC120036.2-201ENST00000509729 1474 ntBASIC3.35□□□□□ -1.87
RPL39P62891 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 AC005332.5-201ENST00000591222 2919 ntBASIC3.34□□□□□ -1.87
RPL39P62891 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 AL121950.1-201ENST00000624993 2077 ntBASIC3.34□□□□□ -1.87
RPL39P62891 CASC19-204ENST00000641001 2055 ntBASIC3.34□□□□□ -1.87
RPL39P62891 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPL39P62891 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.34□□□□□ -1.87
RPL39P62891 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPL39P62891 SNORA17.1-201ENST00000362945 126 ntBASIC3.34□□□□□ -1.87
RPL39P62891 MIR921-201ENST00000401133 56 ntBASIC3.34□□□□□ -1.87
RPL39P62891 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 RNA5SP345-201ENST00000410646 108 ntBASIC3.34□□□□□ -1.87
RPL39P62891 RPL35AP24-201ENST00000413846 330 ntBASIC3.34□□□□□ -1.87
RPL39P62891 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 CYCSP10-201ENST00000417973 294 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AF186996.5-201ENST00000418098 904 ntBASIC3.34□□□□□ -1.87
RPL39P62891 PDSS1P1-201ENST00000422953 1114 ntBASIC3.34□□□□□ -1.87
RPL39P62891 RPL7P57-201ENST00000423238 740 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 AC005033.1-201ENST00000428904 813 ntBASIC3.34□□□□□ -1.87
RPL39P62891 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.34□□□□□ -1.87
RPL39P62891 RPS17P8-201ENST00000434525 335 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC093414.1-201ENST00000434712 514 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC092447.2-201ENST00000435487 669 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 RPL34P20-201ENST00000442771 351 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AP000281.1-201ENST00000444036 316 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC073109.1-201ENST00000445066 978 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 KNOP1P3-201ENST00000446933 426 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 YRDCP3-201ENST00000456507 480 ntBASIC3.34□□□□□ -1.87
RPL39P62891 EIF2S2P5-201ENST00000457635 968 ntBASIC3.34□□□□□ -1.87
RPL39P62891 ATP5G1P3-201ENST00000463301 410 ntBASIC3.34□□□□□ -1.87
RPL39P62891 RN7SL184P-201ENST00000488308 297 ntBASIC3.34□□□□□ -1.87
RPL39P62891 RN7SL466P-201ENST00000497546 295 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.34□□□□□ -1.87
RPL39P62891 AC022404.1-201ENST00000555320 273 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC011270.1-201ENST00000558606 583 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC027455.1-201ENST00000574104 594 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.34□□□□□ -1.87
RPL39P62891 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.34□□□□□ -1.87
RPL39P62891 AC079298.2-201ENST00000623885 459 ntBASIC3.34□□□□□ -1.87
RPL39P62891 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RPL39P62891 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPL39P62891 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPL39P62891 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.34□□□□□ -1.88
RPL39P62891 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
RPL39P62891 RBPJP2-201ENST00000618187 1444 ntBASIC3.34□□□□□ -1.88
RPL39P62891 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.34□□□□□ -1.88
RPL39P62891 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPL39P62891 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
RPL39P62891 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RPL39P62891 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPL39P62891 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPL39P62891 TMSB4XP4-201ENST00000323496 618 ntBASIC3.33□□□□□ -1.88
RPL39P62891 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 U3.2-201ENST00000362981 210 ntBASIC3.33□□□□□ -1.88
RPL39P62891 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RPL39P62891 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 DUTP5-201ENST00000406790 469 ntBASIC3.33□□□□□ -1.88
RPL39P62891 VDAC1P9-201ENST00000412766 841 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL39P62891 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 RPL23AP19-201ENST00000436229 369 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms