Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.33□□□□□ -1.72
LMO4P61968 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 RN7SKP104-201ENST00000362605 328 ntBASIC4.33□□□□□ -1.72
LMO4P61968 RNA5SP123-201ENST00000363244 119 ntBASIC4.33□□□□□ -1.72
LMO4P61968 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 RN7SKP17-201ENST00000411242 351 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 VN1R37P-201ENST00000419096 748 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 NDUFA5P1-201ENST00000433858 341 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.33□□□□□ -1.72
LMO4P61968 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.33□□□□□ -1.72
LMO4P61968 AL772161.1-201ENST00000439130 476 ntBASIC4.33□□□□□ -1.72
LMO4P61968 RPS29P10-201ENST00000439197 166 ntBASIC4.33□□□□□ -1.72
LMO4P61968 ARL5AP3-201ENST00000439327 386 ntBASIC4.33□□□□□ -1.72
LMO4P61968 TPTE2P3-201ENST00000441562 1189 ntBASIC4.33□□□□□ -1.72
LMO4P61968 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 BUD31P2-201ENST00000449374 300 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 AC068587.2-201ENST00000478386 781 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC012123.2-201ENST00000485809 248 ntBASIC4.33□□□□□ -1.72
LMO4P61968 OR11I1P-201ENST00000486033 954 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.33□□□□□ -1.72
LMO4P61968 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.33□□□□□ -1.72
LMO4P61968 AC016550.3-201ENST00000515706 767 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.33□□□□□ -1.72
LMO4P61968 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 AC008147.3-201ENST00000548666 354 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC012414.2-201ENST00000559474 187 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.33□□□□□ -1.72
LMO4P61968 AC104072.1-201ENST00000568817 668 ntBASIC4.33□□□□□ -1.72
LMO4P61968 ABI1P1-201ENST00000603375 1120 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC013244.3-201ENST00000605614 388 ntBASIC4.33□□□□□ -1.72
LMO4P61968 OR51C1P-201ENST00000608504 942 ntBASIC4.33□□□□□ -1.72
LMO4P61968 EIF3FP1-201ENST00000613970 806 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AL445528.2-201ENST00000620582 470 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AP001784.1-201ENST00000624107 428 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC009039.2-201ENST00000624524 529 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC005618.4-201ENST00000625053 554 ntBASIC4.33□□□□□ -1.72
LMO4P61968 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
LMO4P61968 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 AC006453.5-201ENST00000636451 619 ntBASIC4.33□□□□□ -1.72
LMO4P61968 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LMO4P61968 Z95114.1-201ENST00000624264 14574 ntBASIC4.33□□□□□ -1.72
LMO4P61968 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 AL138820.1-201ENST00000617901 5305 ntBASIC4.32□□□□□ -1.72
LMO4P61968 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AC079298.1-201ENST00000625026 1619 ntBASIC4.32□□□□□ -1.72
LMO4P61968 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 AC010132.2-201ENST00000295493 1043 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RN7SKP185-201ENST00000362813 326 ntBASIC4.32□□□□□ -1.72
LMO4P61968 MIR137-201ENST00000385223 102 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-1320P-201ENST00000390838 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNA5SP105-201ENST00000391123 113 ntBASIC4.32□□□□□ -1.72
LMO4P61968 RNU6-1269P-201ENST00000391139 107 ntBASIC4.32□□□□□ -1.72
LMO4P61968 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 GAPDHP15-201ENST00000398586 975 ntBASIC4.32□□□□□ -1.72
LMO4P61968 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 AL078599.1-201ENST00000402075 293 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 GJA6P-201ENST00000415117 1042 ntBASIC4.32□□□□□ -1.72
LMO4P61968 OR13Z1P-201ENST00000416141 834 ntBASIC4.32□□□□□ -1.72
LMO4P61968 GLUD1P9-201ENST00000420997 1173 ntBASIC4.32□□□□□ -1.72
LMO4P61968 DDX39BP1-205ENST00000422507 192 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LMO4P61968 AC124944.2-201ENST00000429866 1242 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.32□□□□□ -1.72
LMO4P61968 MTCO1P57-201ENST00000432182 261 ntBASIC4.32□□□□□ -1.72
LMO4P61968 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.32□□□□□ -1.72
LMO4P61968 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.32□□□□□ -1.72
LMO4P61968 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms