Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.41□□□□□ -1.7
ACTBP60709 AC004980.3-201ENST00000447046 365 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC144530.1-201ENST00000452862 555 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AL356981.1-201ENST00000454879 684 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC016687.1-201ENST00000482574 353 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC058823.1-201ENST00000485315 474 ntBASIC4.41□□□□□ -1.7
ACTBP60709 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 ENPP7P9-201ENST00000514456 627 ntBASIC4.41□□□□□ -1.7
ACTBP60709 HMGB1P19-201ENST00000517578 577 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.41□□□□□ -1.7
ACTBP60709 HNRNPRP2-201ENST00000528421 743 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC022882.1-201ENST00000532142 501 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTBP60709 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.41□□□□□ -1.7
ACTBP60709 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 AC060766.1-201ENST00000590824 627 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC008814.1-201ENST00000603797 406 ntBASIC4.41□□□□□ -1.7
ACTBP60709 SNORD91B-202ENST00000608459 222 ntBASIC4.41□□□□□ -1.7
ACTBP60709 RN7SL787P-201ENST00000613000 284 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AL118522.2-201ENST00000616045 615 ntBASIC4.41□□□□□ -1.7
ACTBP60709 MTCO1P1-201ENST00000624263 1081 ntBASIC4.41□□□□□ -1.7
ACTBP60709 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTBP60709 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
ACTBP60709 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 CUL4AP1-201ENST00000514750 1863 ntBASIC4.41□□□□□ -1.7
ACTBP60709 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTBP60709 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACTBP60709 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.4□□□□□ -1.7
ACTBP60709 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACTBP60709 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.4□□□□□ -1.7
ACTBP60709 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACTBP60709 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ACTBP60709 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 OR8V1P-201ENST00000395193 873 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 Z93019.1-201ENST00000416450 973 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 TMBIM7P-201ENST00000418074 855 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 AC016724.1-201ENST00000453215 421 ntBASIC4.4□□□□□ -1.71
ACTBP60709 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 APOOP2-201ENST00000461561 539 ntBASIC4.4□□□□□ -1.71
ACTBP60709 RPL7P40-201ENST00000481703 745 ntBASIC4.4□□□□□ -1.71
ACTBP60709 PPIAP19-201ENST00000486414 492 ntBASIC4.4□□□□□ -1.71
ACTBP60709 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.4□□□□□ -1.71
ACTBP60709 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 PGBD4P4-201ENST00000509673 613 ntBASIC4.4□□□□□ -1.71
ACTBP60709 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTBP60709 AC074087.1-201ENST00000512059 724 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTBP60709 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTBP60709 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTBP60709 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTBP60709 AL049830.4-201ENST00000555149 351 ntBASIC4.4□□□□□ -1.71
ACTBP60709 NDUFB4P11-201ENST00000560510 395 ntBASIC4.4□□□□□ -1.71
ACTBP60709 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTBP60709 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTBP60709 FO393422.1-201ENST00000603908 708 ntBASIC4.4□□□□□ -1.71
ACTBP60709 BNIP3P35-201ENST00000604530 490 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTBP60709 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 AC132068.1-201ENST00000623805 459 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AL691477.1-201ENST00000624398 162 ntBASIC4.4□□□□□ -1.71
ACTBP60709 AL355480.1-201ENST00000629041 99 ntBASIC4.4□□□□□ -1.71
ACTBP60709 CASC19-222ENST00000641321 1173 ntBASIC4.4□□□□□ -1.71
ACTBP60709 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTBP60709 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ACTBP60709 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTBP60709 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTBP60709 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTBP60709 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTBP60709 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.39□□□□□ -1.71
ACTBP60709 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ACTBP60709 RNA5SP435-201ENST00000364044 108 ntBASIC4.39□□□□□ -1.71
ACTBP60709 RN7SKP15-201ENST00000364742 309 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms