Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MTCO3P27-201ENST00000514397 196 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AP003355.1-201ENST00000518956 587 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 OR1AB1P-201ENST00000585564 761 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN2P57739 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.3□□□□□ -1.56
CLDN2P57739 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.3□□□□□ -1.56
CLDN2P57739 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC093388.1-201ENST00000609166 430 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC009163.6-201ENST00000612367 342 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 AC090527.3-201ENST00000619041 548 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN2P57739 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CLDN2P57739 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 AC003973.3-201ENST00000624863 2822 ntBASIC5.3□□□□□ -1.56
CLDN2P57739 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.3□□□□□ -1.56
CLDN2P57739 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLDN2P57739 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 CDC27P2-201ENST00000425026 1922 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC114947.2-201ENST00000565748 2125 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 AL138820.1-201ENST00000617901 5305 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN2P57739 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 U3.36-201ENST00000408418 213 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RN7SKP17-201ENST00000411242 351 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN2P57739 AC234781.4-201ENST00000419384 244 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 MTCYBP12-201ENST00000440559 1134 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN2P57739 RPS23P9-201ENST00000448848 438 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RPL7P55-201ENST00000450522 746 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC069277.2-201ENST00000454211 432 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RN7SL188P-201ENST00000469842 285 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC090058.1-201ENST00000498788 435 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 TPT1P8-201ENST00000510120 555 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC108120.2-201ENST00000512973 294 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC110775.1-201ENST00000513721 462 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RNU5A-7P-201ENST00000515979 116 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RN7SKP66-201ENST00000516681 231 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 AC087888.1-201ENST00000550884 1254 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 OR11H3P-201ENST00000554547 982 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 AC068620.3-201ENST00000602749 560 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC133644.2-201ENST00000608142 540 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.29□□□□□ -1.56
CLDN2P57739 AC016597.2-201ENST00000613256 341 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CLDN2P57739 AC093875.1-201ENST00000623688 504 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 AC135068.5-201ENST00000624197 983 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 LINC01739-205ENST00000641890 573 ntBASIC5.29□□□□□ -1.56
CLDN2P57739 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.29□□□□□ -1.56
CLDN2P57739 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CLDN2P57739 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN2P57739 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CLDN2P57739 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN2P57739 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN2P57739 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN2P57739 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN2P57739 MSL3P1-202ENST00000440028 1468 ntBASIC5.28□□□□□ -1.56
CLDN2P57739 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN2P57739 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CLDN2P57739 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN2P57739 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN2P57739 SNORA72.3-201ENST00000365074 132 ntBASIC5.28□□□□□ -1.56
CLDN2P57739 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms