Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC105031.1-201ENST00000518550 476 ntBASIC4.75□□□□□ -1.65
LIM2P55344 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.75□□□□□ -1.65
LIM2P55344 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 MIR4691-201ENST00000583764 85 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC037198.3-201ENST00000616754 526 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC018445.2-201ENST00000622987 260 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AP002799.1-201ENST00000623552 423 ntBASIC4.75□□□□□ -1.65
LIM2P55344 MRRFP1-201ENST00000435941 1675 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AL022393.1-201ENST00000625142 1677 ntBASIC4.75□□□□□ -1.65
LIM2P55344 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
LIM2P55344 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LIM2P55344 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LIM2P55344 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIM2P55344 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LIM2P55344 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.74□□□□□ -1.65
LIM2P55344 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LIM2P55344 AC011503.2-201ENST00000594230 1500 ntBASIC4.74□□□□□ -1.65
LIM2P55344 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LIM2P55344 RNU4-4P-201ENST00000364588 130 ntBASIC4.74□□□□□ -1.65
LIM2P55344 RNA5SP428-201ENST00000365129 132 ntBASIC4.74□□□□□ -1.65
LIM2P55344 SNORA70.10-201ENST00000384515 134 ntBASIC4.74□□□□□ -1.65
LIM2P55344 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LIM2P55344 AL356968.2-201ENST00000412769 1257 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 BMS1P13-201ENST00000417301 885 ntBASIC4.74□□□□□ -1.65
LIM2P55344 VN1R31P-201ENST00000417498 730 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 RPL35AP21-201ENST00000437667 333 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AL450023.3-201ENST00000440592 271 ntBASIC4.74□□□□□ -1.65
LIM2P55344 GTF3AP5-201ENST00000442645 697 ntBASIC4.74□□□□□ -1.65
LIM2P55344 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.74□□□□□ -1.65
LIM2P55344 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 MRPL35P2-201ENST00000448009 511 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIM2P55344 AC069304.1-201ENST00000491593 704 ntBASIC4.74□□□□□ -1.65
LIM2P55344 OR5M14P-201ENST00000506803 618 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.74□□□□□ -1.65
LIM2P55344 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.74□□□□□ -1.65
LIM2P55344 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 AC008126.1-201ENST00000549019 480 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.74□□□□□ -1.65
LIM2P55344 AC087763.1-201ENST00000603391 286 ntBASIC4.74□□□□□ -1.65
LIM2P55344 QTRT1P1-201ENST00000604344 1078 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AL445222.1-201ENST00000607259 628 ntBASIC4.74□□□□□ -1.65
LIM2P55344 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.74□□□□□ -1.65
LIM2P55344 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.74□□□□□ -1.65
LIM2P55344 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.74□□□□□ -1.65
LIM2P55344 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LIM2P55344 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LIM2P55344 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.74□□□□□ -1.65
LIM2P55344 CASC19-281ENST00000642118 1554 ntBASIC4.74□□□□□ -1.65
LIM2P55344 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIM2P55344 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LIM2P55344 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
LIM2P55344 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 MTCO1P8-201ENST00000416914 1523 ntBASIC4.73□□□□□ -1.65
LIM2P55344 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIM2P55344 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIM2P55344 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.73□□□□□ -1.65
LIM2P55344 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LIM2P55344 RNU6-1331P-201ENST00000363658 106 ntBASIC4.73□□□□□ -1.65
LIM2P55344 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AC005522.1-201ENST00000395416 346 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AC013442.1-201ENST00000397347 228 ntBASIC4.73□□□□□ -1.65
LIM2P55344 LRRC37BP1-201ENST00000398851 714 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AL078599.1-201ENST00000402075 293 ntBASIC4.73□□□□□ -1.65
LIM2P55344 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.73□□□□□ -1.65
LIM2P55344 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.73□□□□□ -1.65
LIM2P55344 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LIM2P55344 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 CEACAMP7-201ENST00000444105 496 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AL691482.1-201ENST00000453255 87 ntBASIC4.73□□□□□ -1.65
LIM2P55344 RPL7AP6-201ENST00000477943 801 ntBASIC4.73□□□□□ -1.65
LIM2P55344 RN7SL808P-201ENST00000496066 299 ntBASIC4.73□□□□□ -1.65
LIM2P55344 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.73□□□□□ -1.65
LIM2P55344 AL049874.4-201ENST00000557593 255 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.73□□□□□ -1.65
LIM2P55344 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 AC016180.1-201ENST00000567945 403 ntBASIC4.73□□□□□ -1.65
LIM2P55344 EIF1P5-201ENST00000585002 234 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AC013244.1-201ENST00000604279 193 ntBASIC4.73□□□□□ -1.65
LIM2P55344 MIR6719-201ENST00000622428 87 ntBASIC4.73□□□□□ -1.65
LIM2P55344 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.73□□□□□ -1.65
LIM2P55344 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LIM2P55344 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.73□□□□□ -1.65
LIM2P55344 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.73□□□□□ -1.65
LIM2P55344 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
LIM2P55344 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms