Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NR1H2P55055 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 AP000756.2-201ENST00000624168 2567 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NR1H2P55055 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.4□□□□□ -1.54
NR1H2P55055 AC092681.1-201ENST00000297369 291 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 SNORA21-201ENST00000362423 132 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NR1H2P55055 SUGT1P2-201ENST00000379452 992 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 MIR130B-202ENST00000385018 82 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 RNA5SP91-201ENST00000390902 119 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL031985.1-201ENST00000392713 418 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NR1H2P55055 NCSTNP1-201ENST00000406229 144 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL512422.1-201ENST00000407033 553 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC069282.1-201ENST00000411911 526 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 RPL6P29-201ENST00000414863 865 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.4□□□□□ -1.54
NR1H2P55055 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 AC023128.2-201ENST00000420880 1223 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.4□□□□□ -1.54
NR1H2P55055 RPL7P29-201ENST00000437151 728 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL031663.1-201ENST00000437445 219 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL353662.1-201ENST00000439099 327 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.4□□□□□ -1.54
NR1H2P55055 FCF1P6-201ENST00000456841 595 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 ACA64.1-201ENST00000459171 127 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 SNORD125-201ENST00000459538 96 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC110749.1-201ENST00000462007 357 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 RPS17P11-201ENST00000474297 293 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 CBX1P5-201ENST00000475330 559 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC092865.4-201ENST00000477936 615 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL049874.2-201ENST00000492636 288 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AL158068.1-201ENST00000506116 616 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 AC112198.4-201ENST00000515450 351 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 IGKV3D-25-201ENST00000519599 235 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.4□□□□□ -1.54
NR1H2P55055 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 AP000916.1-201ENST00000533869 835 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.4□□□□□ -1.54
NR1H2P55055 AC027104.1-201ENST00000563702 681 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.4□□□□□ -1.54
NR1H2P55055 MIR3936-201ENST00000584304 110 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC090236.2-201ENST00000587933 1101 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC012254.3-201ENST00000591183 2117 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC011445.2-201ENST00000599274 173 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 AC100767.2-201ENST00000604840 693 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.4□□□□□ -1.54
NR1H2P55055 AC005156.1-201ENST00000613371 573 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 BNIP3P41-202ENST00000616656 861 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 MIR6886-201ENST00000619864 61 ntBASIC5.4□□□□□ -1.54
NR1H2P55055 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
NR1H2P55055 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.4□□□□□ -1.55
NR1H2P55055 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NR1H2P55055 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
NR1H2P55055 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
NR1H2P55055 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.4□□□□□ -1.55
NR1H2P55055 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NR1H2P55055 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.4□□□□□ -1.55
NR1H2P55055 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NR1H2P55055 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NR1H2P55055 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NR1H2P55055 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.39□□□□□ -1.55
NR1H2P55055 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.39□□□□□ -1.55
NR1H2P55055 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 AC104260.2-201ENST00000623551 3497 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
NR1H2P55055 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NR1H2P55055 SAMMSON-213ENST00000641336 1521 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 PHKBP1-201ENST00000450951 1951 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 AC026523.2-201ENST00000625039 7739 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.39□□□□□ -1.55
NR1H2P55055 RNU1-134P-201ENST00000362935 165 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.39□□□□□ -1.55
NR1H2P55055 RNU6-317P-201ENST00000384031 107 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
NR1H2P55055 ATF1P1-201ENST00000406040 927 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 AC013404.1-201ENST00000413068 249 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 HMGB3P31-201ENST00000413333 595 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NR1H2P55055 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.39□□□□□ -1.55
NR1H2P55055 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.39□□□□□ -1.55
NR1H2P55055 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.39□□□□□ -1.55
NR1H2P55055 ELOCP6-201ENST00000429066 328 ntBASIC5.39□□□□□ -1.55
NR1H2P55055 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms