Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCS2P54868 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCS2P54868 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.7□□□□□ -1.5
HMGCS2P54868 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGCS2P54868 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCS2P54868 FAM27B-201ENST00000610601 213 ntBASIC5.7□□□□□ -1.5
HMGCS2P54868 DHX40P1-201ENST00000588725 1412 ntBASIC5.7□□□□□ -1.5
HMGCS2P54868 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HMGCS2P54868 AC092070.2-203ENST00000598377 3644 ntBASIC5.7□□□□□ -1.5
HMGCS2P54868 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS2P54868 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGCS2P54868 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS2P54868 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGCS2P54868 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS2P54868 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 AL049697.2-201ENST00000403708 294 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 AC114755.2-201ENST00000413520 361 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS2P54868 SCAND3P1-201ENST00000439854 1060 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 OR52A4P-201ENST00000472867 958 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGCS2P54868 SCARNA22-201ENST00000503991 125 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS2P54868 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS2P54868 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS2P54868 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGCS2P54868 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 MIR4715-201ENST00000584117 79 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGCS2P54868 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGCS2P54868 KARSP3-201ENST00000571212 1504 ntBASIC5.69□□□□□ -1.5
HMGCS2P54868 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGCS2P54868 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCS2P54868 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 OR4K15-201ENST00000305051 1216 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 FAM3C2-201ENST00000312214 681 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 SNORA70F-201ENST00000384142 135 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 SNORA11-201ENST00000408789 128 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 RPS27AP7-201ENST00000422792 455 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 FABP7P1-201ENST00000424004 391 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGCS2P54868 AC000111.2-201ENST00000448200 210 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS2P54868 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCS2P54868 AC068587.1-201ENST00000483613 781 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS2P54868 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS2P54868 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS2P54868 ATP5J2P6-201ENST00000565203 266 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS2P54868 AC022884.2-201ENST00000578535 580 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AC093765.1-201ENST00000603758 881 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGCS2P54868 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGCS2P54868 AL138960.1-201ENST00000613838 513 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AL049794.2-201ENST00000616301 365 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AL022401.1-201ENST00000619498 108 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AL359757.1-201ENST00000623176 255 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.68□□□□□ -1.5
HMGCS2P54868 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGCS2P54868 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 AC120036.2-201ENST00000509729 1474 ntBASIC5.68□□□□□ -1.5
HMGCS2P54868 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
HMGCS2P54868 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMGCS2P54868 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGCS2P54868 AP002512.4-202ENST00000641599 4530 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGCS2P54868 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
HMGCS2P54868 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS2P54868 MSL3P1-202ENST00000440028 1468 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGCS2P54868 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 SNORA70.2-201ENST00000364506 135 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGCS2P54868 U3.22-201ENST00000391120 215 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS2P54868 AC021876.1-201ENST00000425959 359 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AC016831.4-201ENST00000438302 307 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 RPS5P7-201ENST00000456664 608 ntBASIC5.67□□□□□ -1.5
HMGCS2P54868 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGCS2P54868 RNU2-30P-201ENST00000516209 141 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms