Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 SMG1P6-201ENST00000532337 2930 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
LIMK1P53667 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
LIMK1P53667 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 AC004656.1-201ENST00000568479 4951 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LIMK1P53667 RPL10P10-201ENST00000403509 664 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 RNA5SP487-201ENST00000410186 122 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 NPM1P40-201ENST00000412758 733 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 RPL23AP4-201ENST00000427757 463 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 MTND2P2-201ENST00000434633 945 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AL450263.2-201ENST00000439400 589 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 FHP1-201ENST00000442741 703 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC069277.2-201ENST00000454211 432 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC007537.2-201ENST00000472093 511 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 RPSAP51-201ENST00000497462 645 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 HMGB1P47-201ENST00000511281 589 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC078899.1-201ENST00000521432 1185 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 SNX6P1-201ENST00000601728 1224 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.41□□□□□ -1.54
LIMK1P53667 AC007620.3-201ENST00000608131 497 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC025574.2-201ENST00000615621 514 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC003001.2-201ENST00000616294 831 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC026367.3-201ENST00000619032 590 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AL162233.1-201ENST00000620014 944 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 LINC00216-201ENST00000623548 1126 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 AC073869.10-201ENST00000642016 354 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
LIMK1P53667 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LIMK1P53667 AC130304.1-201ENST00000622942 2385 ntBASIC5.41□□□□□ -1.54
LIMK1P53667 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LIMK1P53667 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.4□□□□□ -1.54
LIMK1P53667 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LIMK1P53667 RN7SKP185-201ENST00000362813 326 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LIMK1P53667 RNU1-149P-201ENST00000390870 161 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 RPS16P5-201ENST00000406501 404 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.4□□□□□ -1.54
LIMK1P53667 RPS6P23-201ENST00000413224 722 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 OR6C64P-201ENST00000419708 825 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 AL590609.2-201ENST00000421430 368 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.4□□□□□ -1.54
LIMK1P53667 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.4□□□□□ -1.54
LIMK1P53667 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 AC091153.1-201ENST00000466297 402 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LIMK1P53667 RN7SL591P-201ENST00000496150 292 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 AC015864.1-201ENST00000496512 544 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.4□□□□□ -1.54
LIMK1P53667 RNU6-941P-201ENST00000516346 108 ntBASIC5.4□□□□□ -1.54
LIMK1P53667 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.4□□□□□ -1.54
LIMK1P53667 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms