Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC090602.1-201ENST00000469695 252 ntBASIC5.41□□□□□ -1.54
LHX1P48742 RPL37AP8-201ENST00000494116 276 ntBASIC5.41□□□□□ -1.54
LHX1P48742 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 AC231760.1-201ENST00000498002 260 ntBASIC5.41□□□□□ -1.54
LHX1P48742 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
LHX1P48742 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.41□□□□□ -1.54
LHX1P48742 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.41□□□□□ -1.54
LHX1P48742 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
LHX1P48742 MTCYBP13-201ENST00000578634 1093 ntBASIC5.41□□□□□ -1.54
LHX1P48742 MIR4691-201ENST00000583764 85 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.41□□□□□ -1.54
LHX1P48742 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 AC011487.3-201ENST00000593607 453 ntBASIC5.41□□□□□ -1.54
LHX1P48742 AC105254.2-201ENST00000603636 436 ntBASIC5.41□□□□□ -1.54
LHX1P48742 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 AC092451.3-201ENST00000625067 1343 ntBASIC5.41□□□□□ -1.54
LHX1P48742 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
LHX1P48742 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LHX1P48742 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 SMG1P7-201ENST00000565246 2704 ntBASIC5.4□□□□□ -1.54
LHX1P48742 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 INTS6P1-201ENST00000504674 2530 ntBASIC5.4□□□□□ -1.54
LHX1P48742 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
LHX1P48742 AP000473.2-201ENST00000602659 1537 ntBASIC5.4□□□□□ -1.54
LHX1P48742 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LHX1P48742 AL133270.1-201ENST00000402635 279 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AL358178.1-201ENST00000407698 397 ntBASIC5.4□□□□□ -1.54
LHX1P48742 SEPT7P8-201ENST00000413308 775 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.4□□□□□ -1.54
LHX1P48742 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 AC009506.2-201ENST00000420635 840 ntBASIC5.4□□□□□ -1.54
LHX1P48742 NPM1P26-201ENST00000426339 738 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC046176.1-201ENST00000435260 1170 ntBASIC5.4□□□□□ -1.54
LHX1P48742 RAB28P3-201ENST00000448325 597 ntBASIC5.4□□□□□ -1.54
LHX1P48742 RPL31P20-201ENST00000449593 360 ntBASIC5.4□□□□□ -1.54
LHX1P48742 MORF4L1P4-201ENST00000450245 976 ntBASIC5.4□□□□□ -1.54
LHX1P48742 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.4□□□□□ -1.54
LHX1P48742 AL645937.3-201ENST00000453647 936 ntBASIC5.4□□□□□ -1.54
LHX1P48742 RN7SL441P-201ENST00000492388 296 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC010350.1-201ENST00000504908 231 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AK4P6-201ENST00000505168 528 ntBASIC5.4□□□□□ -1.54
LHX1P48742 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LHX1P48742 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
LHX1P48742 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.4□□□□□ -1.54
LHX1P48742 OR5AZ1P-201ENST00000527448 943 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.4□□□□□ -1.54
LHX1P48742 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
LHX1P48742 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.4□□□□□ -1.54
LHX1P48742 AC067838.1-201ENST00000606064 577 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC026367.3-201ENST00000619032 590 ntBASIC5.4□□□□□ -1.54
LHX1P48742 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LHX1P48742 AC112694.2-201ENST00000623697 768 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AL353662.3-201ENST00000625131 237 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
LHX1P48742 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.4□□□□□ -1.54
LHX1P48742 AC119674.1-220ENST00000641502 1048 ntBASIC5.4□□□□□ -1.54
LHX1P48742 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LHX1P48742 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LHX1P48742 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.4□□□□□ -1.55
LHX1P48742 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.4□□□□□ -1.55
LHX1P48742 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.4□□□□□ -1.55
LHX1P48742 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.4□□□□□ -1.55
LHX1P48742 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.39□□□□□ -1.55
LHX1P48742 RNA5SP123-201ENST00000363244 119 ntBASIC5.39□□□□□ -1.55
LHX1P48742 RNA5SP428-201ENST00000365129 132 ntBASIC5.39□□□□□ -1.55
LHX1P48742 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.39□□□□□ -1.55
LHX1P48742 AC007618.1-201ENST00000366455 732 ntBASIC5.39□□□□□ -1.55
LHX1P48742 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LHX1P48742 RNU6-152P-201ENST00000384037 107 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AP002530.1-201ENST00000405705 684 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.39□□□□□ -1.55
LHX1P48742 TRY2P-201ENST00000448860 689 ntBASIC5.39□□□□□ -1.55
LHX1P48742 OR52E3P-201ENST00000452083 936 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 SUMO2P4-201ENST00000504193 276 ntBASIC5.39□□□□□ -1.55
LHX1P48742 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.39□□□□□ -1.55
LHX1P48742 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.39□□□□□ -1.55
LHX1P48742 AC110775.1-201ENST00000513721 462 ntBASIC5.39□□□□□ -1.55
LHX1P48742 RNA5SP43-201ENST00000516559 110 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AP002981.1-201ENST00000517692 975 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.39□□□□□ -1.55
LHX1P48742 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.39□□□□□ -1.55
LHX1P48742 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.39□□□□□ -1.55
LHX1P48742 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.39□□□□□ -1.55
LHX1P48742 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.39□□□□□ -1.55
LHX1P48742 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.39□□□□□ -1.55
LHX1P48742 AC073575.2-201ENST00000614212 627 ntBASIC5.39□□□□□ -1.55
LHX1P48742 AC003001.2-201ENST00000616294 831 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms