Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
TRIM23P36406 AL360270.2-201ENST00000562952 5985 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AP001029.2-203ENST00000589795 4910 ntBASIC5.15□□□□□ -1.59
TRIM23P36406 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TRIM23P36406 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM23P36406 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 ABCC13-202ENST00000463099 3842 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 AC006210.2-201ENST00000367074 1545 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 MTCO1P8-201ENST00000416914 1523 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM23P36406 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 SNURFL-201ENST00000309296 343 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 NPM1P40-201ENST00000412758 733 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC016769.2-201ENST00000414815 475 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC093162.1-201ENST00000419682 124 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 DDX39BP1-205ENST00000422507 192 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AL136231.1-201ENST00000429407 730 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 VN1R54P-201ENST00000435210 1049 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 SBDSP1-204ENST00000453858 737 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 RNU6-775P-201ENST00000459318 96 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM23P36406 AC147055.1-201ENST00000509261 750 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 RN7SKP34-201ENST00000516142 244 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM23P36406 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM23P36406 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM23P36406 MIR4646-201ENST00000580775 63 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM23P36406 AP000919.1-201ENST00000582850 985 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM23P36406 AC011626.1-201ENST00000604710 562 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 AC133644.2-201ENST00000608142 540 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 MIR6730-201ENST00000622213 67 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM23P36406 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM23P36406 AC023421.1-201ENST00000590535 1785 ntBASIC5.14□□□□□ -1.59
TRIM23P36406 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM23P36406 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM23P36406 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 RN7SKP224-201ENST00000364140 325 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 MIR589-201ENST00000385238 99 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 SNORA68.2-201ENST00000391263 128 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 CHMP1B2P-201ENST00000399581 597 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL109941.1-201ENST00000401925 229 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL078599.1-201ENST00000402075 293 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AC079809.1-201ENST00000415468 276 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 HMGB1P32-201ENST00000425971 565 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AC006455.6-201ENST00000426192 893 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM23P36406 AL138787.1-202ENST00000437804 898 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 RN7SL189P-201ENST00000468631 289 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 RN7SL826P-201ENST00000479724 288 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AC093827.1-201ENST00000480094 861 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 NIP7P2-201ENST00000485801 544 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 RN7SL814P-201ENST00000487715 300 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 COX6B1P2-201ENST00000489624 230 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 RN7SL346P-201ENST00000491561 294 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM23P36406 AC021193.1-201ENST00000511607 420 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM23P36406 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM23P36406 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 MIR3936-201ENST00000584304 110 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 AC138473.1-201ENST00000605717 526 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL159169.2-201ENST00000610061 1269 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 AL162574.1-201ENST00000615702 950 ntBASIC5.13□□□□□ -1.59
TRIM23P36406 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM23P36406 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM23P36406 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM23P36406 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM23P36406 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM23P36406 CASC19-281ENST00000642118 1554 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms