Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 RNA5SP305-201ENST00000362665 119 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 RNU4-44P-201ENST00000363050 141 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 SNORA66-201ENST00000384792 133 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AL078599.1-201ENST00000402075 293 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.04□□□□□ -1.6
HMGCLP35914 RN7SKP16-201ENST00000410180 299 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 RN7SKP97-201ENST00000410966 333 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 CTSL3P-202ENST00000412179 788 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCLP35914 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCLP35914 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 TPT1P1-201ENST00000458495 518 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AC093890.1-201ENST00000502554 540 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AC010350.1-201ENST00000504908 231 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AC008638.1-201ENST00000506035 866 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 RNU6-751P-201ENST00000516382 101 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 RN7SKP66-201ENST00000516681 231 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCLP35914 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCLP35914 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCLP35914 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGCLP35914 AC093799.2-201ENST00000610062 578 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 SDR42E1P1-201ENST00000611327 477 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AL627230.1-201ENST00000613077 211 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGCLP35914 AL591926.8-201ENST00000616876 211 ntBASIC5.04□□□□□ -1.6
HMGCLP35914 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.04□□□□□ -1.6
HMGCLP35914 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGCLP35914 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HMGCLP35914 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGCLP35914 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCLP35914 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 RNA5SP507-201ENST00000363603 121 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCLP35914 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 Z97832.1-201ENST00000402490 328 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCLP35914 RN7SKP213-201ENST00000410746 298 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 DPPA2P3-201ENST00000411853 655 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC007738.1-201ENST00000413892 348 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 RPL23AP27-201ENST00000415161 451 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.03□□□□□ -1.6
HMGCLP35914 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCLP35914 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 NPM1P48-201ENST00000436002 853 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AL450023.3-201ENST00000440592 271 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 TXNP5-201ENST00000441043 315 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 RPL34P20-201ENST00000442771 351 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 IGHV5-78-201ENST00000450948 295 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 RNU6-775P-201ENST00000459318 96 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 RPSAP50-201ENST00000481955 852 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCLP35914 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCLP35914 AC004980.4-201ENST00000513375 203 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 RNA5SP43-201ENST00000516559 110 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC013701.1-201ENST00000522657 465 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.03□□□□□ -1.6
HMGCLP35914 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 HMGN2P6-201ENST00000551091 273 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCLP35914 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 BX005214.3-202ENST00000619809 325 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AP002799.1-201ENST00000623552 423 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 AP000648.2-201ENST00000624182 404 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCLP35914 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.03□□□□□ -1.6
HMGCLP35914 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.03□□□□□ -1.6
HMGCLP35914 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HMGCLP35914 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
HMGCLP35914 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCLP35914 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
HMGCLP35914 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.02□□□□□ -1.61
HMGCLP35914 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCLP35914 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.02□□□□□ -1.61
HMGCLP35914 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCLP35914 AC104623.2-202ENST00000623477 4002 ntBASIC5.02□□□□□ -1.61
HMGCLP35914 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HMGCLP35914 SPTLC1P2-201ENST00000407089 121 ntBASIC5.02□□□□□ -1.61
HMGCLP35914 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms