Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
COPB2P35606 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.07□□□□□ -1.44
COPB2P35606 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.07□□□□□ -1.44
COPB2P35606 DPRXP4-201ENST00000578053 568 ntBASIC6.07□□□□□ -1.44
COPB2P35606 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.07□□□□□ -1.44
COPB2P35606 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB2P35606 AP000769.2-201ENST00000602344 396 ntBASIC6.07□□□□□ -1.44
COPB2P35606 AC009027.1-201ENST00000604510 479 ntBASIC6.07□□□□□ -1.44
COPB2P35606 AC239803.2-201ENST00000610161 430 ntBASIC6.07□□□□□ -1.44
COPB2P35606 EIF3FP1-201ENST00000613970 806 ntBASIC6.07□□□□□ -1.44
COPB2P35606 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COPB2P35606 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB2P35606 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
COPB2P35606 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.07□□□□□ -1.44
COPB2P35606 AC009313.2-201ENST00000417893 1941 ntBASIC6.07□□□□□ -1.44
COPB2P35606 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB2P35606 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.07□□□□□ -1.44
COPB2P35606 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB2P35606 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB2P35606 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COPB2P35606 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COPB2P35606 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COPB2P35606 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COPB2P35606 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COPB2P35606 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COPB2P35606 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 U3.3-201ENST00000362986 216 ntBASIC6.06□□□□□ -1.44
COPB2P35606 RPL6P29-201ENST00000414863 865 ntBASIC6.06□□□□□ -1.44
COPB2P35606 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 OR6C64P-201ENST00000419708 825 ntBASIC6.06□□□□□ -1.44
COPB2P35606 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.06□□□□□ -1.44
COPB2P35606 AC073465.2-201ENST00000440938 498 ntBASIC6.06□□□□□ -1.44
COPB2P35606 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB2P35606 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB2P35606 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.06□□□□□ -1.44
COPB2P35606 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.06□□□□□ -1.44
COPB2P35606 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.06□□□□□ -1.44
COPB2P35606 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.06□□□□□ -1.44
COPB2P35606 MIR6820-201ENST00000611508 62 ntBASIC6.06□□□□□ -1.44
COPB2P35606 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COPB2P35606 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.06□□□□□ -1.44
COPB2P35606 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COPB2P35606 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.06□□□□□ -1.44
COPB2P35606 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COPB2P35606 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COPB2P35606 INTS6P1-201ENST00000504674 2530 ntBASIC6.05□□□□□ -1.44
COPB2P35606 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB2P35606 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COPB2P35606 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
COPB2P35606 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 AL590806.1-201ENST00000415818 853 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.05□□□□□ -1.44
COPB2P35606 RPS4XP16-201ENST00000427198 791 ntBASIC6.05□□□□□ -1.44
COPB2P35606 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 MTCO1P45-201ENST00000431457 267 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB2P35606 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 AC058823.1-201ENST00000485315 474 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 AC091912.1-201ENST00000511351 248 ntBASIC6.05□□□□□ -1.44
COPB2P35606 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 BRD9P1-201ENST00000529855 560 ntBASIC6.05□□□□□ -1.44
COPB2P35606 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.05□□□□□ -1.44
COPB2P35606 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.05□□□□□ -1.44
COPB2P35606 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COPB2P35606 MIR3934-201ENST00000579806 107 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC009237.13-201ENST00000603193 276 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AL139124.1-201ENST00000609123 421 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC093799.2-201ENST00000610062 578 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC100827.5-201ENST00000615883 426 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC091905.4-201ENST00000623432 202 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AP003400.3-201ENST00000624904 346 ntBASIC6.05□□□□□ -1.44
COPB2P35606 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms