Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.94□□□□□ -1.62
SHMT2P34897 SNORA66-201ENST00000384792 133 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AL645927.1-201ENST00000396783 406 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.94□□□□□ -1.62
SHMT2P34897 AC013268.2-201ENST00000420753 337 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 OR5M12P-201ENST00000423388 929 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 OR2AH1P-201ENST00000425717 928 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 COX6CP13-201ENST00000428703 226 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 NFYAP1-201ENST00000431953 972 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 CYCSP24-201ENST00000445119 316 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AC004980.3-201ENST00000447046 365 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AL354714.3-201ENST00000447284 493 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 BTF3P6-201ENST00000448054 499 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.94□□□□□ -1.62
SHMT2P34897 RN7SL329P-201ENST00000467740 299 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 COX6B1P5-201ENST00000509843 249 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 RN7SKP147-201ENST00000517154 244 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHMT2P34897 OR7E128P-201ENST00000532736 1024 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.94□□□□□ -1.62
SHMT2P34897 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.94□□□□□ -1.62
SHMT2P34897 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.94□□□□□ -1.62
SHMT2P34897 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 RNU6-84P-201ENST00000607737 102 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AC093799.2-201ENST00000610062 578 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 EIF3FP1-201ENST00000613970 806 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 CASC19-222ENST00000641321 1173 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SHMT2P34897 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHMT2P34897 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 AC011447.7-201ENST00000624228 1590 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 CASC19-281ENST00000642118 1554 ntBASIC4.94□□□□□ -1.62
SHMT2P34897 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
SHMT2P34897 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHMT2P34897 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHMT2P34897 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
SHMT2P34897 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.94□□□□□ -1.62
SHMT2P34897 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
SHMT2P34897 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.93□□□□□ -1.62
SHMT2P34897 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
SHMT2P34897 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.93□□□□□ -1.62
SHMT2P34897 Z95331.1-201ENST00000623075 23112 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 RNU4-4P-201ENST00000364588 130 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 SNORA2.3-201ENST00000383920 135 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 CHMP1B2P-201ENST00000399581 597 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 AL078599.1-201ENST00000402075 293 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 Z97832.1-201ENST00000402490 328 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.93□□□□□ -1.62
SHMT2P34897 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.93□□□□□ -1.62
SHMT2P34897 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHMT2P34897 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.93□□□□□ -1.62
SHMT2P34897 RNA5SP103-201ENST00000459503 118 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 AC004453.1-201ENST00000487895 408 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 RN7SL244P-201ENST00000493405 297 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.93□□□□□ -1.62
SHMT2P34897 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.93□□□□□ -1.62
SHMT2P34897 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.93□□□□□ -1.62
SHMT2P34897 NMNAT1P1-201ENST00000554095 876 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 AL390334.1-201ENST00000556395 450 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.93□□□□□ -1.62
SHMT2P34897 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.93□□□□□ -1.62
SHMT2P34897 AL445222.1-201ENST00000607259 628 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 AP003400.2-201ENST00000624036 666 ntBASIC4.93□□□□□ -1.62
SHMT2P34897 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
SHMT2P34897 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.93□□□□□ -1.62
SHMT2P34897 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHMT2P34897 AC097461.1-201ENST00000568928 2821 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHMT2P34897 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SHMT2P34897 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
SHMT2P34897 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SHMT2P34897 AC017079.1-201ENST00000333650 415 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SHMT2P34897 AL035079.1-201ENST00000405210 287 ntBASIC4.92□□□□□ -1.62
SHMT2P34897 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SHMT2P34897 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms