Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 AP005435.3-201ENST00000531260 3198 ntBASIC5.91□□□□□ -1.46
CIITAP33076 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 MAPK10-338ENST00000641647 3362 ntBASIC5.9□□□□□ -1.46
CIITAP33076 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 RNU6-618P-201ENST00000363518 112 ntBASIC5.9□□□□□ -1.46
CIITAP33076 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 RNU1-106P-201ENST00000384382 164 ntBASIC5.9□□□□□ -1.46
CIITAP33076 MIR600-201ENST00000385007 98 ntBASIC5.9□□□□□ -1.46
CIITAP33076 MIR105-2-201ENST00000385083 81 ntBASIC5.9□□□□□ -1.46
CIITAP33076 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CIITAP33076 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AC009506.2-201ENST00000420635 840 ntBASIC5.9□□□□□ -1.46
CIITAP33076 MTCO1P51-201ENST00000427672 1060 ntBASIC5.9□□□□□ -1.46
CIITAP33076 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.9□□□□□ -1.46
CIITAP33076 MTND4LP14-201ENST00000429447 288 ntBASIC5.9□□□□□ -1.46
CIITAP33076 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 RPS29P10-201ENST00000439197 166 ntBASIC5.9□□□□□ -1.46
CIITAP33076 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 MTND2P30-201ENST00000456663 382 ntBASIC5.9□□□□□ -1.46
CIITAP33076 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 RN7SKP34-201ENST00000516142 244 ntBASIC5.9□□□□□ -1.46
CIITAP33076 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.9□□□□□ -1.46
CIITAP33076 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.9□□□□□ -1.46
CIITAP33076 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CIITAP33076 RN7SL290P-201ENST00000578661 300 ntBASIC5.9□□□□□ -1.46
CIITAP33076 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.9□□□□□ -1.46
CIITAP33076 AC006116.3-201ENST00000592968 361 ntBASIC5.9□□□□□ -1.46
CIITAP33076 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.9□□□□□ -1.46
CIITAP33076 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.9□□□□□ -1.46
CIITAP33076 AC013244.1-201ENST00000604279 193 ntBASIC5.9□□□□□ -1.46
CIITAP33076 RNA5SP439-201ENST00000617595 124 ntBASIC5.9□□□□□ -1.46
CIITAP33076 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CIITAP33076 AC107021.2-201ENST00000567714 2095 ntBASIC5.9□□□□□ -1.47
CIITAP33076 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.9□□□□□ -1.47
CIITAP33076 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CIITAP33076 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
CIITAP33076 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
CIITAP33076 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CIITAP33076 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CIITAP33076 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CIITAP33076 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
CIITAP33076 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
CIITAP33076 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.89□□□□□ -1.47
CIITAP33076 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.89□□□□□ -1.47
CIITAP33076 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.89□□□□□ -1.47
CIITAP33076 MIR133A2-201ENST00000347538 102 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AL353625.1-202ENST00000366273 571 ntBASIC5.89□□□□□ -1.47
CIITAP33076 OR1L6-202ENST00000373684 1044 ntBASIC5.89□□□□□ -1.47
CIITAP33076 U3.23-201ENST00000391132 200 ntBASIC5.89□□□□□ -1.47
CIITAP33076 CCNB2P1-201ENST00000399411 1150 ntBASIC5.89□□□□□ -1.47
CIITAP33076 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.89□□□□□ -1.47
CIITAP33076 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.89□□□□□ -1.47
CIITAP33076 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.89□□□□□ -1.47
CIITAP33076 ARAFP1-201ENST00000422172 605 ntBASIC5.89□□□□□ -1.47
CIITAP33076 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.89□□□□□ -1.47
CIITAP33076 MTCYBP32-201ENST00000427945 1084 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC092647.2-201ENST00000452998 253 ntBASIC5.89□□□□□ -1.47
CIITAP33076 RN7SL189P-201ENST00000468631 289 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC022336.1-201ENST00000475510 337 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC098583.1-201ENST00000480875 255 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.89□□□□□ -1.47
CIITAP33076 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.89□□□□□ -1.47
CIITAP33076 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
CIITAP33076 AC027338.1-201ENST00000514840 825 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC027369.5-201ENST00000533838 755 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC106785.3-201ENST00000564064 847 ntBASIC5.89□□□□□ -1.47
CIITAP33076 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CIITAP33076 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.89□□□□□ -1.47
CIITAP33076 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.89□□□□□ -1.47
CIITAP33076 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.89□□□□□ -1.47
CIITAP33076 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.89□□□□□ -1.47
CIITAP33076 AP005432.2-201ENST00000608162 586 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AL121612.2-201ENST00000612261 482 ntBASIC5.89□□□□□ -1.47
CIITAP33076 RPSAP73-201ENST00000614820 330 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AC008147.4-201ENST00000617570 1204 ntBASIC5.89□□□□□ -1.47
CIITAP33076 AL158062.1-201ENST00000619632 745 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms