Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP1P29466 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.37□□□□□ -1.55
CASP1P29466 AC087763.1-201ENST00000603391 286 ntBASIC5.37□□□□□ -1.55
CASP1P29466 AC087783.2-201ENST00000605070 562 ntBASIC5.37□□□□□ -1.55
CASP1P29466 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP1P29466 AL121612.2-201ENST00000612261 482 ntBASIC5.37□□□□□ -1.55
CASP1P29466 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.37□□□□□ -1.55
CASP1P29466 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CASP1P29466 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
CASP1P29466 TLK1P1-201ENST00000456760 2440 ntBASIC5.37□□□□□ -1.55
CASP1P29466 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CASP1P29466 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP1P29466 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP1P29466 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP1P29466 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.36□□□□□ -1.55
CASP1P29466 OR2AM1P-201ENST00000422137 422 ntBASIC5.36□□□□□ -1.55
CASP1P29466 RPL7P57-201ENST00000423238 740 ntBASIC5.36□□□□□ -1.55
CASP1P29466 RPS17P8-201ENST00000434525 335 ntBASIC5.36□□□□□ -1.55
CASP1P29466 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CASP1P29466 RN7SL515P-201ENST00000463999 297 ntBASIC5.36□□□□□ -1.55
CASP1P29466 RN7SL177P-201ENST00000476596 299 ntBASIC5.36□□□□□ -1.55
CASP1P29466 AC069304.1-201ENST00000491593 704 ntBASIC5.36□□□□□ -1.55
CASP1P29466 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 EIF3FP1-201ENST00000613970 806 ntBASIC5.36□□□□□ -1.55
CASP1P29466 AP002799.1-201ENST00000623552 423 ntBASIC5.36□□□□□ -1.55
CASP1P29466 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CASP1P29466 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.36□□□□□ -1.55
CASP1P29466 RARSP1-201ENST00000542842 1418 ntBASIC5.36□□□□□ -1.55
CASP1P29466 SAMMSON-226ENST00000642089 1582 ntBASIC5.36□□□□□ -1.55
CASP1P29466 MUC2-202ENST00000613187 4845 ntBASIC5.36□□□□□ -1.55
CASP1P29466 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CASP1P29466 MIPEPP2-201ENST00000422560 1819 ntBASIC5.36□□□□□ -1.55
CASP1P29466 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CASP1P29466 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CASP1P29466 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CASP1P29466 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 RNU1-82P-201ENST00000390851 165 ntBASIC5.35□□□□□ -1.55
CASP1P29466 HMGB3P7-201ENST00000400214 611 ntBASIC5.35□□□□□ -1.55
CASP1P29466 RN7SKP278-201ENST00000410504 342 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.35□□□□□ -1.55
CASP1P29466 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 REREP1Y-201ENST00000422655 198 ntBASIC5.35□□□□□ -1.55
CASP1P29466 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 REREP2Y-201ENST00000439103 200 ntBASIC5.35□□□□□ -1.55
CASP1P29466 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 AC234781.3-201ENST00000452540 973 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.35□□□□□ -1.55
CASP1P29466 AC090142.2-201ENST00000483263 416 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC020890.1-201ENST00000491837 504 ntBASIC5.35□□□□□ -1.55
CASP1P29466 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.35□□□□□ -1.55
CASP1P29466 OR5AZ1P-201ENST00000527448 943 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.35□□□□□ -1.55
CASP1P29466 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 AP000919.1-201ENST00000582850 985 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 AL121932.1-201ENST00000605542 214 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 MIR8069-1-201ENST00000616627 86 ntBASIC5.35□□□□□ -1.55
CASP1P29466 MIR8069-2-201ENST00000621412 86 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AL353662.3-201ENST00000625131 237 ntBASIC5.35□□□□□ -1.55
CASP1P29466 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
CASP1P29466 AC026523.2-201ENST00000625039 7739 ntBASIC5.35□□□□□ -1.55
CASP1P29466 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CASP1P29466 AC020633.1-201ENST00000468439 2247 ntBASIC5.35□□□□□ -1.55
CASP1P29466 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.35□□□□□ -1.55
CASP1P29466 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
CASP1P29466 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 AL445487.1-201ENST00000415694 1580 ntBASIC5.34□□□□□ -1.55
CASP1P29466 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CASP1P29466 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.34□□□□□ -1.55
CASP1P29466 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CASP1P29466 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.34□□□□□ -1.55
CASP1P29466 RNU1-83P-201ENST00000363426 164 ntBASIC5.34□□□□□ -1.55
CASP1P29466 RNA5SP507-201ENST00000363603 121 ntBASIC5.34□□□□□ -1.55
CASP1P29466 Z97832.1-201ENST00000402490 328 ntBASIC5.34□□□□□ -1.55
CASP1P29466 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms